RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 JAC1P53193 184 aa-5.13□□□□□ -3.23
snR40snR40 SLO1Q3E784 85 aa-5.13□□□□□ -3.23
snR40snR40 VTH1P40438 1549 aa-5.13□□□□□ -3.23
snR40snR40 VTH2P40890 1549 aa-5.13□□□□□ -3.23
snR40snR40 HSP12P22943 109 aaKnown RBP-5.15□□□□□ -3.23
snR40snR40 YDR476CQ03362 224 aa-5.15□□□□□ -3.23
snR40snR40 YBR090CP38253 122 aa-5.16□□□□□ -3.24
snR40snR40 COX12Q01519 83 aa-5.16□□□□□ -3.24
snR40snR40 YKL018C-AQ3E7A7 99 aa-5.16□□□□□ -3.24
snR40snR40 YCL012CQ8J0M4 134 aa-5.16□□□□□ -3.24
snR40snR40 NHP6BP11633 99 aaKnown RBP-5.17□□□□□ -3.24
snR40snR40 TIM8P57744 87 aa-5.17□□□□□ -3.24
snR40snR40 NSL1Q12143 216 aa-5.17□□□□□ -3.24
snR40snR40 UBC5P15732 148 aa-5.18□□□□□ -3.24
snR40snR40 CWC21Q03375 135 aaKnown RBP-5.18□□□□□ -3.24
snR40snR40 DLS1P40366 167 aa-5.19□□□□□ -3.24
snR40snR40 EDC1P53080 175 aaPredicted RBP-5.19□□□□□ -3.24
snR40snR40 YOL118CQ08259 102 aa-5.19□□□□□ -3.24
snR40snR40 RPL30P14120 105 aaKnown RBP-5.2□□□□□ -3.24
snR40snR40 AME1P38313 324 aa-5.2□□□□□ -3.24
snR40snR40 YGR201CP42936 225 aa-5.2□□□□□ -3.24
snR40snR40 YLR361C-AQ3E795 98 aa-5.2□□□□□ -3.24
snR40snR40 LSM6Q06406 86 aaKnown RBP-5.21□□□□□ -3.24
snR40snR40 EFG1Q3E705 233 aaKnown RBP-5.21□□□□□ -3.24
snR40snR40 CUP1-1P0CX80 61 aa-5.22□□□□□ -3.25
snR40snR40 CUP1-2P0CX81 61 aa-5.22□□□□□ -3.25
snR40snR40 MOG1P47123 218 aa-5.22□□□□□ -3.25
snR40snR40 Q0032Q9ZZX7 96 aa-5.22□□□□□ -3.25
snR40snR40 LSM3P57743 89 aaKnown RBP-5.23□□□□□ -3.25
snR40snR40 HSK3P69852 69 aa-5.23□□□□□ -3.25
snR40snR40 PAU20Q08322 120 aa-5.23□□□□□ -3.25
snR40snR40 DNF3Q12674 1656 aa-5.24□□□□□ -3.25
snR40snR40 QCR7P00128 127 aa-5.25□□□□□ -3.25
snR40snR40 CNL1Q06333 122 aa-5.25□□□□□ -3.25
snR40snR40 ACP1P32463 125 aa-5.26□□□□□ -3.25
snR40snR40 YIR021W-AQ3E739 70 aa-5.26□□□□□ -3.25
snR40snR40 PCC1Q3E833 88 aa-5.26□□□□□ -3.25
snR40snR40 TOS6P48560 102 aa-5.27□□□□□ -3.25
snR40snR40 PAU12P53343 120 aa-5.27□□□□□ -3.25
snR40snR40 SDH6Q3E785 79 aa-5.27□□□□□ -3.25
snR40snR40 MOT1P32333 1867 aa-5.28□□□□□ -3.25
snR40snR40 ERV14P53173 138 aa-5.29□□□□□ -3.26
snR40snR40 MRPS17Q03246 237 aaPredicted RBP-5.31□□□□□ -3.26
snR40snR40 RPL22BP56628 122 aaKnown RBP-5.32□□□□□ -3.26
snR40snR40 GRX3Q03835 250 aa-5.32□□□□□ -3.26
snR40snR40 CSF1Q12150 2958 aa-5.33□□□□□ -3.26
snR40snR40 RPL35AP0CX84 120 aaKnown RBP-5.33□□□□□ -3.26
snR40snR40 RPL35BP0CX85 120 aaKnown RBP-5.33□□□□□ -3.26
snR40snR40 SHG1P38337 142 aa-5.33□□□□□ -3.26
snR40snR40 YIR020CP40575 100 aa-5.33□□□□□ -3.26
snR40snR40 MAK3Q03503 176 aa-5.33□□□□□ -3.26
snR40snR40 OST5Q92316 86 aa-5.33□□□□□ -3.26
snR40snR40 CBF1P17106 351 aa-5.34□□□□□ -3.26
snR40snR40 YCR050CP25630 102 aa-5.34□□□□□ -3.26
snR40snR40 TOM6P33448 61 aa-5.34□□□□□ -3.26
snR40snR40 SNO1Q03144 224 aa-5.34□□□□□ -3.26
snR40snR40 YNL042W-BQ3E7Z2 85 aa-5.34□□□□□ -3.26
snR40snR40 SRB8P25648 1427 aa-5.34□□□□□ -3.26
snR40snR40 CMD1P06787 147 aaKnown RBP-5.35□□□□□ -3.27
snR40snR40 APQ12P40532 138 aa-5.35□□□□□ -3.27
snR40snR40 YNR034W-AQ3E841 98 aa-5.35□□□□□ -3.27
snR40snR40 MRP17P28778 131 aa-5.36□□□□□ -3.27
snR40snR40 PAU24P38155 120 aa-5.36□□□□□ -3.27
snR40snR40 SNN1P48232 102 aa-5.36□□□□□ -3.27
snR40snR40 YBR201C-AQ2V2Q3 67 aa-5.37□□□□□ -3.27
snR40snR40 GPI19Q04082 140 aa-5.38□□□□□ -3.27
snR40snR40 SUI1P32911 108 aaKnown RBP-5.4□□□□□ -3.27
snR40snR40 SIP18P50263 79 aa-5.4□□□□□ -3.27
snR40snR40 YHR130CP38834 111 aa-5.41□□□□□ -3.28
snR40snR40 RTR2Q12378 196 aa-5.42□□□□□ -3.28
snR40snR40 YCR099CP25657 155 aa-5.43□□□□□ -3.28
snR40snR40 IRA1P18963 3092 aa-5.43□□□□□ -3.28
snR40snR40 YHR138CP38841 114 aaPredicted RBP-5.44□□□□□ -3.28
snR40snR40 PGA2P53903 129 aa-5.44□□□□□ -3.28
snR40snR40 YPR202WQ08993 238 aa-5.44□□□□□ -3.28
snR40snR40 PAU2P32612 120 aa-5.45□□□□□ -3.28
snR40snR40 YBR032WP38223 100 aa-5.45□□□□□ -3.28
snR40snR40 FRQ1Q06389 190 aa-5.45□□□□□ -3.28
snR40snR40 PAU6P0CE90 120 aa-5.46□□□□□ -3.28
snR40snR40 PAU18P0CE91 120 aa-5.46□□□□□ -3.28
snR40snR40 ARC19P33204 171 aaKnown RBP-5.47□□□□□ -3.29
snR40snR40 PAU1P0CE88 120 aa-5.48□□□□□ -3.29
snR40snR40 PAU14P0CE89 120 aa-5.48□□□□□ -3.29
snR40snR40 PAU8P0CE92 120 aa-5.48□□□□□ -3.29
snR40snR40 PAU11P0CE93 120 aa-5.48□□□□□ -3.29
snR40snR40 PAU13P38725 120 aa-5.48□□□□□ -3.29
snR40snR40 MSS2P40990 351 aa-5.48□□□□□ -3.29
snR40snR40 PAU10Q03050 120 aa-5.48□□□□□ -3.29
snR40snR40 PAU9Q3E770 120 aa-5.48□□□□□ -3.29
snR40snR40 YPR108W-AQ3E7B3 70 aa-5.48□□□□□ -3.29
snR40snR40 PAU19P0CE85 124 aa-5.49□□□□□ -3.29
snR40snR40 PAU3P25610 124 aa-5.49□□□□□ -3.29
snR40snR40 AIM19P40502 157 aa-5.49□□□□□ -3.29
snR40snR40 SNA2P56508 79 aa-5.49□□□□□ -3.29
snR40snR40 LYS2P07702 1392 aa-5.5□□□□□ -3.29
snR40snR40 YCR085WP25650 117 aa-5.5□□□□□ -3.29
snR40snR40 PAU15P40585 124 aa-5.51□□□□□ -3.29
snR40snR40 MPC1P53157 130 aaKnown RBP-5.51□□□□□ -3.29
snR40snR40 ATP18P81450 59 aa-5.52□□□□□ -3.29
snR40snR40 GTT1P40582 234 aa-5.53□□□□□ -3.29
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms