RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W HPA2Q06592 156 aa1.14□□□□□ -2.23
PEP12YOR036W SCP1Q08873 200 aa1.14□□□□□ -2.23
PEP12YOR036W DNA2P38859 1522 aa1.14□□□□□ -2.23
PEP12YOR036W SWR1Q05471 1514 aa1.14□□□□□ -2.23
PEP12YOR036W CDC39P25655 2108 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W SEC7P11075 2009 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W TY4B-JP47024 1803 aa1.13□□□□□ -2.23
PEP12YOR036W RRP5Q05022 1729 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W UBC4P15731 148 aa1.13□□□□□ -2.23
PEP12YOR036W YCR001WP25347 104 aa1.13□□□□□ -2.23
PEP12YOR036W YMR090WQ04304 227 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W IRC21Q04772 201 aa1.13□□□□□ -2.23
PEP12YOR036W PRM3Q08931 133 aa1.13□□□□□ -2.23
PEP12YOR036W PCC1Q3E833 88 aa1.13□□□□□ -2.23
PEP12YOR036W YOS1Q3E834 85 aa1.13□□□□□ -2.23
PEP12YOR036W ACC1Q00955 2233 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W PDR12Q02785 1511 aa1.13□□□□□ -2.23
PEP12YOR036W USO1P25386 1790 aa1.13□□□□□ -2.23
PEP12YOR036W PDR11P40550 1411 aa1.13□□□□□ -2.23
PEP12YOR036W RPA190P10964 1664 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W CHC1P22137 1653 aaKnown RBP1.13□□□□□ -2.23
PEP12YOR036W DOP1Q03921 1698 aa1.13□□□□□ -2.23
PEP12YOR036W IQG1Q12280 1495 aa1.12□□□□□ -2.23
PEP12YOR036W YPK9Q12697 1472 aa1.12□□□□□ -2.23
PEP12YOR036W RSF2P46974 1380 aa1.12□□□□□ -2.23
PEP12YOR036W GDB1Q06625 1536 aa1.12□□□□□ -2.23
PEP12YOR036W PAU2P32612 120 aa1.12□□□□□ -2.23
PEP12YOR036W SRX1P36077 127 aa1.12□□□□□ -2.23
PEP12YOR036W POR2P40478 281 aa1.12□□□□□ -2.23
PEP12YOR036W YIR020CP40575 100 aa1.12□□□□□ -2.23
PEP12YOR036W VMA21P41806 77 aa1.12□□□□□ -2.23
PEP12YOR036W SNN1P48232 102 aa1.12□□□□□ -2.23
PEP12YOR036W YGL194C-AQ2V2P6 80 aa1.12□□□□□ -2.23
PEP12YOR036W MIC10Q96VH5 97 aa1.12□□□□□ -2.23
PEP12YOR036W NTE1Q04958 1679 aa1.12□□□□□ -2.23
PEP12YOR036W DNF1P32660 1571 aa1.12□□□□□ -2.23
PEP12YOR036W VPS15P22219 1454 aa1.12□□□□□ -2.23
PEP12YOR036W GEA2P39993 1459 aaKnown RBP1.12□□□□□ -2.23
PEP12YOR036W MYO1P08964 1928 aa1.11□□□□□ -2.23
PEP12YOR036W YSF3P0C074 85 aaPredicted RBP1.11□□□□□ -2.23
PEP12YOR036W PAU19P0CE85 124 aa1.11□□□□□ -2.23
PEP12YOR036W PAU3P25610 124 aa1.11□□□□□ -2.23
PEP12YOR036W PAU24P38155 120 aa1.11□□□□□ -2.23
PEP12YOR036W AIM4P38305 123 aaPredicted RBP1.11□□□□□ -2.23
PEP12YOR036W COX23P38824 151 aa1.11□□□□□ -2.23
PEP12YOR036W RPL37AP49166 88 aaKnown RBP1.11□□□□□ -2.23
PEP12YOR036W YNL122CP53921 115 aaPredicted RBP1.11□□□□□ -2.23
PEP12YOR036W MMS22Q06164 1454 aa1.11□□□□□ -2.23
PEP12YOR036W BNI1P41832 1953 aa1.1□□□□□ -2.23
PEP12YOR036W GEA1P47102 1408 aaPredicted RBP1.1□□□□□ -2.23
PEP12YOR036W YIL163CP40448 117 aa1.1□□□□□ -2.23
PEP12YOR036W YJL009WP47078 108 aa1.1□□□□□ -2.23
PEP12YOR036W COA6Q3E846 104 aa1.1□□□□□ -2.23
PEP12YOR036W KSH1Q8TGJ3 72 aa1.1□□□□□ -2.23
PEP12YOR036W RIF1P29539 1916 aa1.1□□□□□ -2.23
PEP12YOR036W ESP1Q03018 1630 aa1.1□□□□□ -2.23
PEP12YOR036W POL1P13382 1468 aa1.1□□□□□ -2.23
PEP12YOR036W ECM29P38737 1868 aa1.09□□□□□ -2.23
PEP12YOR036W APC1P53886 1748 aa1.09□□□□□ -2.23
PEP12YOR036W SRB8P25648 1427 aa1.09□□□□□ -2.23
PEP12YOR036W RPL22AP05749 121 aaKnown RBP1.09□□□□□ -2.23
PEP12YOR036W YBR013CP38215 129 aa1.09□□□□□ -2.23
PEP12YOR036W YOR072WQ08486 104 aa1.09□□□□□ -2.23
PEP12YOR036W YLR363W-AQ3E747 85 aa1.09□□□□□ -2.23
PEP12YOR036W YCR075W-AQ3E830 75 aa1.09□□□□□ -2.23
PEP12YOR036W NUP170P38181 1502 aa1.09□□□□□ -2.24
PEP12YOR036W ROM2P51862 1356 aaKnown RBP1.08□□□□□ -2.24
PEP12YOR036W THO2P53552 1597 aaKnown RBP1.08□□□□□ -2.24
PEP12YOR036W SMC4Q12267 1418 aa1.08□□□□□ -2.24
PEP12YOR036W NUP159P40477 1460 aa1.08□□□□□ -2.24
PEP12YOR036W RPS22AP0C0W1 130 aaKnown RBP1.08□□□□□ -2.24
PEP12YOR036W CYB5P40312 120 aa1.08□□□□□ -2.24
PEP12YOR036W MIX14Q04341 121 aa1.08□□□□□ -2.24
PEP12YOR036W YLR285C-AQ3E771 56 aa1.08□□□□□ -2.24
PEP12YOR036W RPS22BQ3E7Y3 130 aaKnown RBP1.08□□□□□ -2.24
PEP12YOR036W CDC25P04821 1589 aa1.08□□□□□ -2.24
PEP12YOR036W MLP1Q02455 1875 aaKnown RBP1.07□□□□□ -2.24
PEP12YOR036W CAT8P39113 1433 aa1.07□□□□□ -2.24
PEP12YOR036W YBT1P32386 1661 aa1.07□□□□□ -2.24
PEP12YOR036W TY3B-IQ7LHG5 1498 aaKnown RBP1.07□□□□□ -2.24
PEP12YOR036W STU1P38198 1513 aa1.07□□□□□ -2.24
PEP12YOR036W YFR010W-AP0C5N0 62 aa1.07□□□□□ -2.24
PEP12YOR036W PAU16P35994 123 aa1.07□□□□□ -2.24
PEP12YOR036W HHY1P39982 102 aa1.07□□□□□ -2.24
PEP12YOR036W PAU15P40585 124 aa1.07□□□□□ -2.24
PEP12YOR036W ICS3P47034 131 aa1.07□□□□□ -2.24
PEP12YOR036W MIC27P50945 234 aa1.07□□□□□ -2.24
PEP12YOR036W MGR2Q02889 113 aa1.07□□□□□ -2.24
PEP12YOR036W FIT3Q08907 204 aa1.07□□□□□ -2.24
PEP12YOR036W RKR1Q04781 1562 aa1.07□□□□□ -2.24
PEP12YOR036W TY3B-GQ99315 1547 aa1.06□□□□□ -2.24
PEP12YOR036W HMRA2P0CY13 119 aa1.06□□□□□ -2.24
PEP12YOR036W SNU13P39990 126 aaKnown RBP1.06□□□□□ -2.24
PEP12YOR036W NUP188P52593 1655 aaKnown RBP1.06□□□□□ -2.24
PEP12YOR036W PMD1P32634 1753 aa1.06□□□□□ -2.24
PEP12YOR036W YLR419WQ06698 1435 aaKnown RBP1.06□□□□□ -2.24
PEP12YOR036W GSC2P40989 1895 aa1.05□□□□□ -2.24
PEP12YOR036W SRB6P32570 121 aa1.05□□□□□ -2.24
PEP12YOR036W MVB12P42939 101 aa1.05□□□□□ -2.24
PEP12YOR036W YMR082CQ04276 118 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms