RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C NHP2P32495 156 aaPredicted RBP1.94□□□□□ -2.1
DNL4YOR005C SFT2P38166 215 aa1.94□□□□□ -2.1
DNL4YOR005C YBL071CP38185 102 aa1.94□□□□□ -2.1
DNL4YOR005C CIS3P47001 227 aa1.94□□□□□ -2.1
DNL4YOR005C FCF1Q05498 189 aaPredicted RBP1.94□□□□□ -2.1
DNL4YOR005C RAF1Q06891 181 aa1.94□□□□□ -2.1
DNL4YOR005C FZF1P32805 299 aa1.93□□□□□ -2.1
DNL4YOR005C OST2P46964 130 aa1.93□□□□□ -2.1
DNL4YOR005C YHP1Q04116 353 aa1.93□□□□□ -2.1
DNL4YOR005C DAD1Q12248 94 aa1.93□□□□□ -2.1
DNL4YOR005C YCR075W-AQ3E830 75 aa1.93□□□□□ -2.1
DNL4YOR005C YFR032C-BQ8TGU2 87 aa1.93□□□□□ -2.1
DNL4YOR005C LDB16P25587 256 aa1.93□□□□□ -2.1
DNL4YOR005C TOM7P53507 60 aa1.93□□□□□ -2.1
DNL4YOR005C YIL014C-AQ02598 104 aa1.93□□□□□ -2.1
DNL4YOR005C GPI19Q04082 140 aa1.93□□□□□ -2.1
DNL4YOR005C DGA1Q08650 418 aa1.93□□□□□ -2.1
DNL4YOR005C YIR021W-AQ3E739 70 aa1.93□□□□□ -2.1
DNL4YOR005C YLR342W-AQ3E810 57 aa1.93□□□□□ -2.1
DNL4YOR005C VAR1P02381 398 aa1.92□□□□□ -2.1
DNL4YOR005C SNF11P38956 169 aa1.92□□□□□ -2.1
DNL4YOR005C SKI6P46948 246 aaPredicted RBP1.92□□□□□ -2.1
DNL4YOR005C DAD4P69851 72 aa1.92□□□□□ -2.1
DNL4YOR005C MGR2Q02889 113 aa1.92□□□□□ -2.1
DNL4YOR005C YMR103CQ04436 120 aa1.92□□□□□ -2.1
DNL4YOR005C HPA2Q06592 156 aa1.92□□□□□ -2.1
DNL4YOR005C YOS1Q3E834 85 aa1.92□□□□□ -2.1
DNL4YOR005C PFY1P07274 126 aa1.92□□□□□ -2.1
DNL4YOR005C CYR1P08678 2026 aaKnown RBP1.92□□□□□ -2.1
DNL4YOR005C KRE1P17260 313 aa1.92□□□□□ -2.1
DNL4YOR005C YEL045CP32616 141 aa1.92□□□□□ -2.1
DNL4YOR005C YGP1P38616 354 aaKnown RBP1.92□□□□□ -2.1
DNL4YOR005C YHR130CP38834 111 aa1.92□□□□□ -2.1
DNL4YOR005C YNL217WP40152 326 aa1.92□□□□□ -2.1
DNL4YOR005C YFL065CP43539 102 aa1.92□□□□□ -2.1
DNL4YOR005C MIX14Q04341 121 aa1.92□□□□□ -2.1
DNL4YOR005C YTH1Q06102 208 aaPredicted RBP1.92□□□□□ -2.1
DNL4YOR005C YPR203WQ08994 102 aa1.92□□□□□ -2.1
DNL4YOR005C RAD6P06104 172 aa1.91□□□□□ -2.1
DNL4YOR005C YLR156WP0CE96 114 aa1.91□□□□□ -2.1
DNL4YOR005C YLR159WP0CE97 114 aa1.91□□□□□ -2.1
DNL4YOR005C YLR161WP0CE98 114 aa1.91□□□□□ -2.1
DNL4YOR005C YML122CQ03207 126 aa1.91□□□□□ -2.1
DNL4YOR005C YIL046W-AQ3E7Z4 54 aa1.91□□□□□ -2.1
DNL4YOR005C YCR085WP25650 117 aa1.91□□□□□ -2.1
DNL4YOR005C YHR140WP38842 239 aa1.91□□□□□ -2.1
DNL4YOR005C GON7P46984 123 aa1.91□□□□□ -2.1
DNL4YOR005C TOS6P48560 102 aa1.91□□□□□ -2.1
DNL4YOR005C LSM6Q06406 86 aaKnown RBP1.91□□□□□ -2.1
DNL4YOR005C YOR097CQ12274 175 aaPredicted RBP1.91□□□□□ -2.1
DNL4YOR005C YER084WP40057 128 aa1.9□□□□□ -2.1
DNL4YOR005C LST8P41318 303 aa1.9□□□□□ -2.1
DNL4YOR005C ECO1P43605 281 aa1.9□□□□□ -2.1
DNL4YOR005C TMC1Q08422 150 aaPredicted RBP1.9□□□□□ -2.1
DNL4YOR005C CDC39P25655 2108 aaKnown RBP1.9□□□□□ -2.11
DNL4YOR005C BET1P22804 142 aa1.9□□□□□ -2.11
DNL4YOR005C RRT1P38192 103 aa1.9□□□□□ -2.11
DNL4YOR005C YHR125WP38831 101 aa1.9□□□□□ -2.11
DNL4YOR005C YGL088WP53151 121 aa1.9□□□□□ -2.11
DNL4YOR005C HAL1Q01766 294 aa1.9□□□□□ -2.11
DNL4YOR005C YPL261CQ08976 102 aa1.9□□□□□ -2.11
DNL4YOR005C MDN1Q12019 4910 aaKnown RBP1.9□□□□□ -2.11
DNL4YOR005C YKR032WP36127 104 aa1.9□□□□□ -2.11
DNL4YOR005C SPI1P40092 148 aa1.9□□□□□ -2.11
DNL4YOR005C HUA1P40325 198 aa1.9□□□□□ -2.11
DNL4YOR005C SIP18P50263 79 aa1.9□□□□□ -2.11
DNL4YOR005C YFL041W-AQ3E817 63 aa1.9□□□□□ -2.11
DNL4YOR005C FAB1P34756 2278 aa1.89□□□□□ -2.11
DNL4YOR005C CCW14O13547 238 aa1.89□□□□□ -2.11
DNL4YOR005C Q0255P03881 472 aa1.89□□□□□ -2.11
DNL4YOR005C YHR213WP0CI67 198 aa1.89□□□□□ -2.11
DNL4YOR005C ATP15P21306 62 aa1.89□□□□□ -2.11
DNL4YOR005C RPA12P32529 125 aaKnown RBP1.89□□□□□ -2.11
DNL4YOR005C ARC15P40518 154 aaRIP-Chip data1.89□□□□□ -2.11not detected
DNL4YOR005C TSC3Q3E790 80 aa1.89□□□□□ -2.11
DNL4YOR005C COA3Q3E7B2 85 aa1.89□□□□□ -2.11
DNL4YOR005C MRPL24P36525 258 aaPredicted RBP1.89□□□□□ -2.11
DNL4YOR005C CTR2P38865 189 aa1.89□□□□□ -2.11
DNL4YOR005C YMR141CP40211 102 aa1.89□□□□□ -2.11
DNL4YOR005C IMP2P46972 177 aa1.89□□□□□ -2.11
DNL4YOR005C COX12Q01519 83 aa1.89□□□□□ -2.11
DNL4YOR005C UBC7Q02159 165 aa1.89□□□□□ -2.11
DNL4YOR005C YOR268CQ08734 132 aa1.89□□□□□ -2.11
DNL4YOR005C FCY1Q12178 158 aa1.89□□□□□ -2.11
DNL4YOR005C PBI2P0CT04 75 aaKnown RBP1.88□□□□□ -2.11
DNL4YOR005C HMRA2P0CY13 119 aa1.88□□□□□ -2.11
DNL4YOR005C PIR5P46999 287 aa1.88□□□□□ -2.11
DNL4YOR005C YNR077CP53758 84 aa1.88□□□□□ -2.11
DNL4YOR005C YLR194CQ05777 254 aa1.88□□□□□ -2.11
DNL4YOR005C TAO3P40468 2376 aa1.88□□□□□ -2.11
DNL4YOR005C RPS23AP0CX29 145 aaKnown RBP1.88□□□□□ -2.11
DNL4YOR005C RPS23BP0CX30 145 aa1.88□□□□□ -2.11
DNL4YOR005C UTH1P36135 365 aa1.88□□□□□ -2.11
DNL4YOR005C YOR008C-AQ3E7B9 74 aa1.88□□□□□ -2.11
DNL4YOR005C FAS1P07149 2051 aaKnown RBP1.87□□□□□ -2.11
DNL4YOR005C RPL2AP0CX45 254 aaKnown RBP1.87□□□□□ -2.11
DNL4YOR005C RPL2BP0CX46 254 aaKnown RBP1.87□□□□□ -2.11
DNL4YOR005C YEL067CP39978 195 aa1.87□□□□□ -2.11
DNL4YOR005C FIP1P45976 327 aa1.87□□□□□ -2.11
DNL4YOR005C AIM11P87275 137 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms