RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C ECM12O13529 151 aa7.48□□□□□ -1.21
SPT20YOL148C RPL42AP0CX27 106 aaKnown RBP7.48□□□□□ -1.21
SPT20YOL148C RPL42BP0CX28 106 aaKnown RBP7.48□□□□□ -1.21
SPT20YOL148C RPS23AP0CX29 145 aaKnown RBP7.48□□□□□ -1.21
SPT20YOL148C RPS23BP0CX30 145 aa7.48□□□□□ -1.21
SPT20YOL148C ATP15P21306 62 aa7.47□□□□□ -1.21
SPT20YOL148C LDB16P25587 256 aa7.47□□□□□ -1.21
SPT20YOL148C RPL28P02406 149 aaKnown RBP7.46□□□□□ -1.21
SPT20YOL148C PBI2P0CT04 75 aaKnown RBP7.46□□□□□ -1.21
SPT20YOL148C YDR029WQ12111 104 aa7.46□□□□□ -1.21
SPT20YOL148C INO2P26798 304 aa7.45□□□□□ -1.22
SPT20YOL148C SMP1P38128 452 aa7.45□□□□□ -1.22
SPT20YOL148C SGN1P40561 250 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
SPT20YOL148C GAT3Q07928 141 aa7.45□□□□□ -1.22
SPT20YOL148C IRC23Q08416 157 aa7.45□□□□□ -1.22
SPT20YOL148C ADH5P38113 351 aaKnown RBP7.45□□□□□ -1.22
SPT20YOL148C AIM19P40502 157 aa7.45□□□□□ -1.22
SPT20YOL148C YOL160WQ08321 113 aa7.45□□□□□ -1.22
SPT20YOL148C SBH2P52871 88 aa7.44□□□□□ -1.22
SPT20YOL148C YDR381C-AQ3E6R5 114 aa7.44□□□□□ -1.22
SPT20YOL148C MRPL38P35996 138 aaPredicted RBP7.43□□□□□ -1.22
SPT20YOL148C PEX17P40155 199 aa7.43□□□□□ -1.22
SPT20YOL148C RPL18AP0CX49 186 aaKnown RBP7.43□□□□□ -1.22
SPT20YOL148C RPL18BP0CX50 186 aaKnown RBP7.43□□□□□ -1.22
SPT20YOL148C YNL190WP53872 204 aa7.43□□□□□ -1.22
SPT20YOL148C PBA1Q05778 276 aa7.43□□□□□ -1.22
SPT20YOL148C YER039C-AP0CD97 72 aa7.42□□□□□ -1.22
SPT20YOL148C MRPS12P53732 153 aa7.42□□□□□ -1.22
SPT20YOL148C YPL038W-AQ3E7B4 63 aa7.42□□□□□ -1.22
SPT20YOL148C TOM6P33448 61 aa7.41□□□□□ -1.22
SPT20YOL148C YER121WP40076 114 aa7.41□□□□□ -1.22
SPT20YOL148C DCV1P43595 202 aa7.41□□□□□ -1.22
SPT20YOL148C UBC5P15732 148 aa7.41□□□□□ -1.22
SPT20YOL148C YGR219WP53307 113 aa7.4□□□□□ -1.23
SPT20YOL148C YNL234WP53857 426 aa7.4□□□□□ -1.23
SPT20YOL148C SHH4Q06236 168 aa7.4□□□□□ -1.23
SPT20YOL148C YDL009CQ12210 107 aa7.4□□□□□ -1.23
SPT20YOL148C POR2P40478 281 aa7.39□□□□□ -1.23
SPT20YOL148C CTR2P38865 189 aa7.38□□□□□ -1.23
SPT20YOL148C UTH1P36135 365 aa7.38□□□□□ -1.23
SPT20YOL148C YJR146WP47174 117 aa7.38□□□□□ -1.23
SPT20YOL148C MLF3P32047 452 aa7.37□□□□□ -1.23
SPT20YOL148C HUR1P45820 110 aa7.37□□□□□ -1.23
SPT20YOL148C PBP4Q07362 185 aaKnown RBP7.37□□□□□ -1.23
SPT20YOL148C EMC6Q12431 108 aa7.37□□□□□ -1.23
SPT20YOL148C TRP1P00912 224 aa7.36□□□□□ -1.23
SPT20YOL148C KEG1P43614 200 aa7.36□□□□□ -1.23
SPT20YOL148C YGR045CP53229 120 aa7.36□□□□□ -1.23
SPT20YOL148C RPL16AP26784 199 aaKnown RBP7.36□□□□□ -1.23
SPT20YOL148C MPC2P38857 129 aa7.36□□□□□ -1.23
SPT20YOL148C NCE103P53615 221 aa7.35□□□□□ -1.23
SPT20YOL148C NRM1P53718 249 aa7.35□□□□□ -1.23
SPT20YOL148C RPL2AP0CX45 254 aaKnown RBP7.34□□□□□ -1.23
SPT20YOL148C RPL2BP0CX46 254 aaKnown RBP7.34□□□□□ -1.23
SPT20YOL148C SHU1P38751 150 aa7.34□□□□□ -1.23
SPT20YOL148C YNL046WP53956 172 aa7.34□□□□□ -1.23
SPT20YOL148C YBR200W-AQ3E755 54 aa7.34□□□□□ -1.23
SPT20YOL148C QCR8P08525 94 aa7.34□□□□□ -1.24
SPT20YOL148C SIM1P40472 476 aa7.34□□□□□ -1.24
SPT20YOL148C MSA2P36157 363 aa7.33□□□□□ -1.24
SPT20YOL148C SBH1P52870 82 aa7.33□□□□□ -1.24
SPT20YOL148C TAO3P40468 2376 aa7.33□□□□□ -1.24
SPT20YOL148C YBR121C-AP0C5L4 52 aa7.32□□□□□ -1.24
SPT20YOL148C SED1Q01589 338 aa7.32□□□□□ -1.24
SPT20YOL148C RPL15AP05748 204 aaKnown RBP7.31□□□□□ -1.24
SPT20YOL148C YSY6P38374 65 aa7.31□□□□□ -1.24
SPT20YOL148C YHL018WP38744 120 aaPredicted RBP7.31□□□□□ -1.24
SPT20YOL148C RTG1P32607 177 aa7.31□□□□□ -1.24
SPT20YOL148C IES6P32617 166 aa7.31□□□□□ -1.24
SPT20YOL148C YHR022CP38763 256 aa7.3□□□□□ -1.24
SPT20YOL148C YGR025WP53216 100 aa7.3□□□□□ -1.24
SPT20YOL148C YOL085CQ99345 113 aa7.3□□□□□ -1.24
SPT20YOL148C YCR050CP25630 102 aa7.29□□□□□ -1.24
SPT20YOL148C SVP26P38869 228 aa7.29□□□□□ -1.24
SPT20YOL148C RPL16BP26785 198 aaKnown RBP7.29□□□□□ -1.24
SPT20YOL148C BNA1P47096 177 aa7.29□□□□□ -1.24
SPT20YOL148C YLR042CQ07990 161 aa7.29□□□□□ -1.24
SPT20YOL148C DAP1Q12091 152 aa7.29□□□□□ -1.24
SPT20YOL148C RPS28BP0C0X0 67 aaKnown RBP7.28□□□□□ -1.24
SPT20YOL148C RRT13P40042 185 aa7.28□□□□□ -1.24
SPT20YOL148C CCW12Q12127 133 aa7.28□□□□□ -1.24
SPT20YOL148C RPS28AQ3E7X9 67 aaPredicted RBP7.28□□□□□ -1.24
SPT20YOL148C YBR209WP38311 105 aa7.26□□□□□ -1.25
SPT20YOL148C RGM1Q00453 211 aa7.26□□□□□ -1.25
SPT20YOL148C YCL048W-AQ2V2Q2 79 aa7.25□□□□□ -1.25
SPT20YOL148C YHL037CP38733 133 aa7.24□□□□□ -1.25
SPT20YOL148C KTI11Q3E840 82 aa7.24□□□□□ -1.25
SPT20YOL148C YEL008WP40001 126 aa7.24□□□□□ -1.25
SPT20YOL148C WWM1P43582 211 aaKnown RBP7.24□□□□□ -1.25
SPT20YOL148C PPT2Q12036 173 aa7.24□□□□□ -1.25
SPT20YOL148C YER187WP40102 141 aa7.23□□□□□ -1.25
SPT20YOL148C ARC15P40518 154 aaRIP-Chip data7.23□□□□□ -1.25not detected
SPT20YOL148C YGL088WP53151 121 aa7.23□□□□□ -1.25
SPT20YOL148C KRE9P39005 276 aa7.22□□□□□ -1.25
SPT20YOL148C YNL194CP40169 301 aa7.22□□□□□ -1.25
SPT20YOL148C YLR285C-AQ3E771 56 aa7.22□□□□□ -1.25
SPT20YOL148C HFA1P32874 2273 aa7.22□□□□□ -1.25
SPT20YOL148C UBC11P52492 156 aa7.21□□□□□ -1.26
SPT20YOL148C YOR020W-AQ3E824 90 aa7.2□□□□□ -1.26
SPT20YOL148C IRC21Q04772 201 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms