RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C GLO1P50107 326 aa8.62□□□□□ -1.03
LCB1YMR296C YPL080CQ02826 108 aa8.62□□□□□ -1.03
LCB1YMR296C YMR244WQ04018 355 aa8.62□□□□□ -1.03
LCB1YMR296C COA3Q3E7B2 85 aa8.62□□□□□ -1.03
LCB1YMR296C RPL16BP26785 198 aaKnown RBP8.61□□□□□ -1.03
LCB1YMR296C YFR035CP43608 114 aa8.61□□□□□ -1.03
LCB1YMR296C YLR122CQ12312 125 aa8.6□□□□□ -1.03
LCB1YMR296C RPL42AP0CX27 106 aaKnown RBP8.59□□□□□ -1.03
LCB1YMR296C RPL42BP0CX28 106 aaKnown RBP8.59□□□□□ -1.03
LCB1YMR296C MBF1O14467 151 aaKnown RBP8.59□□□□□ -1.03
LCB1YMR296C YKL070WP36087 169 aa8.59□□□□□ -1.03
LCB1YMR296C VTS1Q08831 523 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
LCB1YMR296C Q0255P03881 472 aa8.58□□□□□ -1.04
LCB1YMR296C YDL022C-AP0C5L6 82 aa8.58□□□□□ -1.04
LCB1YMR296C YPL073CP40323 161 aa8.58□□□□□ -1.04
LCB1YMR296C MRPS8Q03799 155 aa8.58□□□□□ -1.04
LCB1YMR296C MRP49P32388 137 aa8.56□□□□□ -1.04
LCB1YMR296C YEL067CP39978 195 aa8.56□□□□□ -1.04
LCB1YMR296C DCV1P43595 202 aa8.56□□□□□ -1.04
LCB1YMR296C ANB1P19211 157 aa8.55□□□□□ -1.04
LCB1YMR296C ECM33P38248 429 aaKnown RBP8.55□□□□□ -1.04
LCB1YMR296C MPC2P38857 129 aa8.55□□□□□ -1.04
LCB1YMR296C YPL261CQ08976 102 aa8.55□□□□□ -1.04
LCB1YMR296C YOR008C-AQ3E7B9 74 aa8.55□□□□□ -1.04
LCB1YMR296C AIM34Q03673 198 aa8.54□□□□□ -1.04
LCB1YMR296C YLR042CQ07990 161 aa8.54□□□□□ -1.04
LCB1YMR296C YNL184CP53876 108 aa8.53□□□□□ -1.04
LCB1YMR296C YML079WQ03629 201 aa8.53□□□□□ -1.04
LCB1YMR296C RRT13P40042 185 aa8.53□□□□□ -1.04
LCB1YMR296C RPL16AP26784 199 aaKnown RBP8.52□□□□□ -1.05
LCB1YMR296C YDR274CP87283 123 aa8.52□□□□□ -1.05
LCB1YMR296C CYC7P00045 113 aa8.51□□□□□ -1.05
LCB1YMR296C RPL32P38061 130 aaKnown RBP8.51□□□□□ -1.05
LCB1YMR296C YNL198CP40166 100 aa8.51□□□□□ -1.05
LCB1YMR296C URM1P40554 99 aaPredicted RBP8.51□□□□□ -1.05
LCB1YMR296C YNR077CP53758 84 aa8.51□□□□□ -1.05
LCB1YMR296C ELC1Q03071 99 aa8.51□□□□□ -1.05
LCB1YMR296C PAI3P01094 68 aa8.5□□□□□ -1.05
LCB1YMR296C YJR146WP47174 117 aa8.5□□□□□ -1.05
LCB1YMR296C YLR281CQ05863 155 aa8.5□□□□□ -1.05
LCB1YMR296C YKR041WP36134 250 aa8.49□□□□□ -1.05
LCB1YMR296C ALG13P53178 202 aa8.49□□□□□ -1.05
LCB1YMR296C AIM11P87275 137 aa8.49□□□□□ -1.05
LCB1YMR296C ATP15P21306 62 aa8.48□□□□□ -1.05
LCB1YMR296C VHS2P40463 436 aa8.48□□□□□ -1.05
LCB1YMR296C VTC1P40046 129 aaRIP-Chip data8.47□□□□□ -1.05not detected
LCB1YMR296C YFR057WP43625 151 aa8.47□□□□□ -1.05
LCB1YMR296C OXA1P39952 402 aa8.46□□□□□ -1.05
LCB1YMR296C YIL102C-AQ2V2P5 75 aa8.46□□□□□ -1.05
LCB1YMR296C MDN1Q12019 4910 aaKnown RBP8.46□□□□□ -1.06
LCB1YMR296C AUA1P32450 94 aa8.46□□□□□ -1.06
LCB1YMR296C ISU2Q12056 156 aa8.46□□□□□ -1.06
LCB1YMR296C RPS8AP0CX39 200 aaKnown RBP8.45□□□□□ -1.06
LCB1YMR296C RPS8BP0CX40 200 aaKnown RBP8.45□□□□□ -1.06
LCB1YMR296C YIR021W-AQ3E739 70 aa8.45□□□□□ -1.06
LCB1YMR296C YGL088WP53151 121 aa8.44□□□□□ -1.06
LCB1YMR296C YLR296WQ05898 108 aa8.44□□□□□ -1.06
LCB1YMR296C YCR075W-AQ3E830 75 aa8.44□□□□□ -1.06
LCB1YMR296C RPL2AP0CX45 254 aaKnown RBP8.43□□□□□ -1.06
LCB1YMR296C RPL2BP0CX46 254 aaKnown RBP8.43□□□□□ -1.06
LCB1YMR296C RPS11AP0CX47 156 aaKnown RBP8.43□□□□□ -1.06
LCB1YMR296C RPS11BP0CX48 156 aaKnown RBP8.43□□□□□ -1.06
LCB1YMR296C YBR209WP38311 105 aa8.43□□□□□ -1.06
LCB1YMR296C YKL023C-AQ2V2P3 75 aa8.43□□□□□ -1.06
LCB1YMR296C YCH1P42937 148 aa8.42□□□□□ -1.06
LCB1YMR296C YLR361C-AQ3E795 98 aa8.41□□□□□ -1.06
LCB1YMR296C IGO2Q9P305 131 aa8.41□□□□□ -1.06
LCB1YMR296C YRA2P36036 203 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
LCB1YMR296C TRP1P00912 224 aa8.4□□□□□ -1.07
LCB1YMR296C YNL217WP40152 326 aa8.4□□□□□ -1.07
LCB1YMR296C SCW10Q04951 389 aa8.4□□□□□ -1.07
LCB1YMR296C YLR194CQ05777 254 aa8.4□□□□□ -1.07
LCB1YMR296C NRG2P38082 220 aa8.39□□□□□ -1.07
LCB1YMR296C YER181CP40097 107 aa8.39□□□□□ -1.07
LCB1YMR296C HYP2P23301 157 aaKnown RBP8.38□□□□□ -1.07
LCB1YMR296C UGX2P32772 223 aa8.38□□□□□ -1.07
LCB1YMR296C YEL008WP40001 126 aa8.38□□□□□ -1.07
LCB1YMR296C YER085CP40058 173 aa8.38□□□□□ -1.07
LCB1YMR296C RPL28P02406 149 aaKnown RBP8.37□□□□□ -1.07
LCB1YMR296C YPS5P53057 165 aa8.37□□□□□ -1.07
LCB1YMR296C RPL18AP0CX49 186 aaKnown RBP8.37□□□□□ -1.07
LCB1YMR296C RPL18BP0CX50 186 aaKnown RBP8.37□□□□□ -1.07
LCB1YMR296C UBC5P15732 148 aa8.37□□□□□ -1.07
LCB1YMR296C MRPS12P53732 153 aa8.37□□□□□ -1.07
LCB1YMR296C KRE9P39005 276 aa8.36□□□□□ -1.07
LCB1YMR296C YIL059CP40520 121 aa8.36□□□□□ -1.07
LCB1YMR296C CDC43P18898 376 aa8.35□□□□□ -1.07
LCB1YMR296C YNL190WP53872 204 aa8.35□□□□□ -1.07
LCB1YMR296C COX12Q01519 83 aa8.35□□□□□ -1.07
LCB1YMR296C MLF3P32047 452 aa8.34□□□□□ -1.07
LCB1YMR296C PMP3P87284 55 aa8.34□□□□□ -1.07
LCB1YMR296C ADH1P00330 348 aaKnown RBP8.34□□□□□ -1.08
LCB1YMR296C MID2P36027 376 aa8.34□□□□□ -1.08
LCB1YMR296C YHR130CP38834 111 aa8.34□□□□□ -1.08
LCB1YMR296C YCL021W-AQ96VH3 125 aa8.34□□□□□ -1.08
LCB1YMR296C MRPL24P36525 258 aaPredicted RBP8.33□□□□□ -1.08
LCB1YMR296C SHU1P38751 150 aa8.32□□□□□ -1.08
LCB1YMR296C PEX17P40155 199 aa8.32□□□□□ -1.08
LCB1YMR296C INO4P13902 151 aa8.3□□□□□ -1.08
LCB1YMR296C RDS3Q06835 107 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms