RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C GEA2P39993 1459 aaKnown RBP1.27□□□□□ -2.21
VPS9YML097C REV3P14284 1504 aa1.26□□□□□ -2.21
VPS9YML097C KSH1Q8TGJ3 72 aa1.26□□□□□ -2.21
VPS9YML097C IRC20Q06554 1556 aa1.25□□□□□ -2.21
VPS9YML097C CCW14O13547 238 aa1.25□□□□□ -2.21
VPS9YML097C YHR138CP38841 114 aaPredicted RBP1.25□□□□□ -2.21
VPS9YML097C LSM6Q06406 86 aaKnown RBP1.24□□□□□ -2.21
VPS9YML097C YOR289WQ12012 251 aaPredicted RBP1.24□□□□□ -2.21
VPS9YML097C LCL1Q02786 101 aa1.23□□□□□ -2.21
VPS9YML097C YDR210WQ03482 75 aa1.23□□□□□ -2.21
VPS9YML097C YPL225WQ08971 146 aaKnown RBP1.23□□□□□ -2.21
VPS9YML097C YJR128WP47162 119 aa1.22□□□□□ -2.21
VPS9YML097C YOR034C-AQ3E735 80 aa1.22□□□□□ -2.21
VPS9YML097C CAT8P39113 1433 aa1.22□□□□□ -2.21
VPS9YML097C YOL118CQ08259 102 aa1.21□□□□□ -2.21
VPS9YML097C TCB3Q03640 1545 aaKnown RBP1.21□□□□□ -2.22
VPS9YML097C DNF1P32660 1571 aa1.2□□□□□ -2.22
VPS9YML097C IMP2P46972 177 aa1.2□□□□□ -2.22
VPS9YML097C ZEO1Q08245 113 aa1.2□□□□□ -2.22
VPS9YML097C YLR255CO13574 117 aa1.19□□□□□ -2.22
VPS9YML097C RPL43AP0CX25 92 aaKnown RBP1.19□□□□□ -2.22
VPS9YML097C RPL43BP0CX26 92 aa1.19□□□□□ -2.22
VPS9YML097C YHL005CP38752 130 aa1.19□□□□□ -2.22
VPS9YML097C RSM19P53733 91 aaPredicted RBP1.19□□□□□ -2.22
VPS9YML097C BNI1P41832 1953 aa1.18□□□□□ -2.22
VPS9YML097C SRB6P32570 121 aa1.18□□□□□ -2.22
VPS9YML097C YOR093CQ12275 1648 aa1.17□□□□□ -2.22
VPS9YML097C THO2P53552 1597 aaKnown RBP1.17□□□□□ -2.22
VPS9YML097C URB1P34241 1764 aaKnown RBP1.17□□□□□ -2.22
VPS9YML097C RPA190P10964 1664 aaKnown RBP1.16□□□□□ -2.22
VPS9YML097C ESC1Q03661 1658 aaKnown RBP1.16□□□□□ -2.22
VPS9YML097C PEP1P32319 1579 aa1.16□□□□□ -2.22
VPS9YML097C YER188C-AP0C0V2 99 aa1.16□□□□□ -2.22
VPS9YML097C PAU5P43575 122 aa1.16□□□□□ -2.22
VPS9YML097C TY1B-BRQ12193 1756 aa1.15□□□□□ -2.22
VPS9YML097C TY1B-GR3Q12316 1755 aa1.15□□□□□ -2.22
VPS9YML097C TY1B-ORQ92393 1755 aa1.15□□□□□ -2.22
VPS9YML097C ROX3P25046 220 aa1.15□□□□□ -2.23
VPS9YML097C SPT6P23615 1451 aaKnown RBP1.15□□□□□ -2.23
VPS9YML097C TY2B-LR1P0C2J3 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-FP0CX63 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-GR2P0CX64 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-CP25384 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-DR2Q03494 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY1B-DR1Q03855 1755 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-DR3Q07791 1770 aaKnown RBP1.15□□□□□ -2.23
VPS9YML097C TY2B-OR1Q12113 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-DR1Q12472 1770 aa1.15□□□□□ -2.23
VPS9YML097C TY2B-OR2Q12501 1770 aa1.15□□□□□ -2.23
VPS9YML097C LTE1P07866 1435 aa1.14□□□□□ -2.23
VPS9YML097C HIR3P47171 1648 aa1.14□□□□□ -2.23
VPS9YML097C YRF1-6P53819 1859 aa1.14□□□□□ -2.23
VPS9YML097C ATG2P53855 1592 aa1.14□□□□□ -2.23
VPS9YML097C YCR095W-AQ3E787 52 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-DR5P0C2I2 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-DR6P0C2I3 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-LR2P0C2I5 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-LR3P0C2I6 1755 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C TY1B-PR1P0C2I9 1755 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C TY1B-PR2P0C2J0 1756 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-PR3P0C2J1 1755 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C TY1B-JR1P47098 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-ML2Q03434 1755 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C TY1B-ER1Q03612 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-ML1Q04711 1755 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C TY1B-GR2Q12269 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-OLQ12273 1755 aa1.14□□□□□ -2.23
VPS9YML097C TY1B-PLQ12414 1755 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C SEC16P48415 2195 aaKnown RBP1.14□□□□□ -2.23
VPS9YML097C RSF2P46974 1380 aa1.13□□□□□ -2.23
VPS9YML097C DNF2Q12675 1612 aa1.13□□□□□ -2.23
VPS9YML097C CDC25P04821 1589 aa1.13□□□□□ -2.23
VPS9YML097C PDR10P51533 1564 aa1.13□□□□□ -2.23
VPS9YML097C SSK2P53599 1579 aa1.13□□□□□ -2.23
VPS9YML097C TY2B-BQ12491 1770 aa1.13□□□□□ -2.23
VPS9YML097C YIL086CP40503 102 aa1.13□□□□□ -2.23
VPS9YML097C COX19Q3E731 98 aa1.13□□□□□ -2.23
VPS9YML097C YPL038W-AQ3E7B4 63 aa1.13□□□□□ -2.23
VPS9YML097C RRT15Q3E811 62 aa1.13□□□□□ -2.23
VPS9YML097C YLR307C-AQ3E825 87 aa1.13□□□□□ -2.23
VPS9YML097C NTE1Q04958 1679 aa1.13□□□□□ -2.23
VPS9YML097C LAA1P39526 2014 aa1.13□□□□□ -2.23
VPS9YML097C TY1B-DR3Q99231 1755 aa1.13□□□□□ -2.23
VPS9YML097C YLR157W-EP0CF00 54 aa1.12□□□□□ -2.23
VPS9YML097C SRB8P25648 1427 aa1.12□□□□□ -2.23
VPS9YML097C YRF1-1P0CX20 1796 aa1.12□□□□□ -2.23
VPS9YML097C YRF1-5P0CX21 1796 aa1.12□□□□□ -2.23
VPS9YML097C YRF1-8P0CX22 1796 aa1.12□□□□□ -2.23
VPS9YML097C YCF1P39109 1515 aaKnown RBP1.12□□□□□ -2.23
VPS9YML097C RPO31P04051 1460 aa1.11□□□□□ -2.23
VPS9YML097C HMRA1P0CY11 126 aa1.11□□□□□ -2.23
VPS9YML097C COX12Q01519 83 aa1.11□□□□□ -2.23
VPS9YML097C TY1B-JR2P47100 1755 aaKnown RBP1.11□□□□□ -2.23
VPS9YML097C TY1B-ER2Q03619 1755 aa1.11□□□□□ -2.23
VPS9YML097C TY1B-MR1Q04214 1755 aa1.11□□□□□ -2.23
VPS9YML097C TY1B-MR2Q04670 1755 aaKnown RBP1.11□□□□□ -2.23
VPS9YML097C TY1B-LR1Q12088 1755 aaKnown RBP1.11□□□□□ -2.23
VPS9YML097C TY1B-NL1Q12112 1755 aa1.11□□□□□ -2.23
VPS9YML097C TY1B-GR1Q12141 1755 aa1.11□□□□□ -2.23
VPS9YML097C TY1B-BLQ12490 1755 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms