RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C RPA12P32529 125 aaKnown RBP3.43□□□□□ -1.86
CDC42YLR229C KTI12P34253 313 aaKnown RBP3.43□□□□□ -1.86
CDC42YLR229C MRPL38P35996 138 aaPredicted RBP3.43□□□□□ -1.86
CDC42YLR229C YDL186WP48568 277 aa3.43□□□□□ -1.86
CDC42YLR229C YPL080CQ02826 108 aa3.43□□□□□ -1.86
CDC42YLR229C DFM1Q12743 341 aaKnown RBP3.43□□□□□ -1.86
CDC42YLR229C COA3Q3E7B2 85 aa3.43□□□□□ -1.86
CDC42YLR229C YFL041W-AQ3E817 63 aa3.43□□□□□ -1.86
CDC42YLR229C POR2P40478 281 aa3.42□□□□□ -1.86
CDC42YLR229C ABF2Q02486 183 aa3.42□□□□□ -1.86
CDC42YLR229C VMA11P32842 164 aa3.41□□□□□ -1.86
CDC42YLR229C MRPL24P36525 258 aaPredicted RBP3.41□□□□□ -1.86
CDC42YLR229C PEX17P40155 199 aa3.41□□□□□ -1.86
CDC42YLR229C KEG1P43614 200 aa3.41□□□□□ -1.86
CDC42YLR229C SKI6P46948 246 aaPredicted RBP3.41□□□□□ -1.86
CDC42YLR229C AIM11P87275 137 aa3.41□□□□□ -1.86
CDC42YLR229C RRG8Q06109 277 aa3.41□□□□□ -1.86
CDC42YLR229C MSA1Q08471 629 aa3.41□□□□□ -1.86
CDC42YLR229C Q0255P03881 472 aa3.4□□□□□ -1.87
CDC42YLR229C RPS8AP0CX39 200 aaKnown RBP3.4□□□□□ -1.87
CDC42YLR229C RPS8BP0CX40 200 aaKnown RBP3.4□□□□□ -1.87
CDC42YLR229C MRPL49P40858 161 aaPredicted RBP3.4□□□□□ -1.87
CDC42YLR229C FIP1P45976 327 aa3.4□□□□□ -1.87
CDC42YLR229C LCB3P47013 409 aa3.4□□□□□ -1.87
CDC42YLR229C YJL027CP47063 138 aaPredicted RBP3.4□□□□□ -1.87
CDC42YLR229C YGR219WP53307 113 aa3.4□□□□□ -1.87
CDC42YLR229C COX12Q01519 83 aa3.4□□□□□ -1.87
CDC42YLR229C YMR317WQ04893 1140 aa3.4□□□□□ -1.87
CDC42YLR229C PBP4Q07362 185 aaKnown RBP3.4□□□□□ -1.87
CDC42YLR229C IRC23Q08416 157 aa3.4□□□□□ -1.87
CDC42YLR229C YAL063C-AQ3E791 96 aa3.4□□□□□ -1.87
CDC42YLR229C Q0297Q9ZZV8 51 aa3.4□□□□□ -1.87
CDC42YLR229C IRA1P18963 3092 aa3.4□□□□□ -1.87
CDC42YLR229C YER085CP40058 173 aa3.39□□□□□ -1.87
CDC42YLR229C GLE2P40066 365 aa3.39□□□□□ -1.87
CDC42YLR229C WWM1P43582 211 aaKnown RBP3.39□□□□□ -1.87
CDC42YLR229C YNR077CP53758 84 aa3.39□□□□□ -1.87
CDC42YLR229C MRPL23Q12487 163 aaPredicted RBP3.39□□□□□ -1.87
CDC42YLR229C RPL43AP0CX25 92 aaKnown RBP3.38□□□□□ -1.87
CDC42YLR229C RPL43BP0CX26 92 aa3.38□□□□□ -1.87
CDC42YLR229C VHS2P40463 436 aa3.38□□□□□ -1.87
CDC42YLR229C DCV1P43595 202 aa3.38□□□□□ -1.87
CDC42YLR229C YFR057WP43625 151 aa3.38□□□□□ -1.87
CDC42YLR229C YGR039WP53225 103 aa3.38□□□□□ -1.87
CDC42YLR229C COF1Q03048 143 aaKnown RBP3.38□□□□□ -1.87
CDC42YLR229C ENV10Q99382 181 aa3.38□□□□□ -1.87
CDC42YLR229C IRA2P19158 3079 aa3.37□□□□□ -1.87
CDC42YLR229C QCR8P08525 94 aa3.37□□□□□ -1.87
CDC42YLR229C RPL18AP0CX49 186 aaKnown RBP3.37□□□□□ -1.87
CDC42YLR229C RPL18BP0CX50 186 aaKnown RBP3.37□□□□□ -1.87
CDC42YLR229C AGA1P32323 725 aa3.37□□□□□ -1.87
CDC42YLR229C MIC12P38341 106 aa3.37□□□□□ -1.87
CDC42YLR229C YHL042WP38729 150 aa3.37□□□□□ -1.87
CDC42YLR229C YEL067CP39978 195 aa3.37□□□□□ -1.87
CDC42YLR229C AIM34Q03673 198 aa3.37□□□□□ -1.87
CDC42YLR229C TRP1P00912 224 aa3.36□□□□□ -1.87
CDC42YLR229C ATP15P21306 62 aa3.36□□□□□ -1.87
CDC42YLR229C INO2P26798 304 aa3.36□□□□□ -1.87
CDC42YLR229C UGX2P32772 223 aa3.36□□□□□ -1.87
CDC42YLR229C TOA2P32774 122 aa3.36□□□□□ -1.87
CDC42YLR229C DSE2P38844 325 aa3.36□□□□□ -1.87
CDC42YLR229C AIM19P40502 157 aa3.36□□□□□ -1.87
CDC42YLR229C YIA6P40556 373 aa3.36□□□□□ -1.87
CDC42YLR229C CAX4P53223 239 aa3.36□□□□□ -1.87
CDC42YLR229C YOL160WQ08321 113 aa3.36□□□□□ -1.87
CDC42YLR229C SRL1Q08673 210 aa3.36□□□□□ -1.87
CDC42YLR229C PPT2Q12036 173 aa3.36□□□□□ -1.87
CDC42YLR229C EMC6Q12431 108 aa3.36□□□□□ -1.87
CDC42YLR229C RPL28P02406 149 aaKnown RBP3.35□□□□□ -1.87
CDC42YLR229C PBI2P0CT04 75 aaKnown RBP3.35□□□□□ -1.87
CDC42YLR229C NRG2P38082 220 aa3.35□□□□□ -1.87
CDC42YLR229C YNL194CP40169 301 aa3.35□□□□□ -1.87
CDC42YLR229C YIL059CP40520 121 aa3.35□□□□□ -1.87
CDC42YLR229C HUR1P45820 110 aa3.35□□□□□ -1.87
CDC42YLR229C SHH4Q06236 168 aa3.35□□□□□ -1.87
CDC42YLR229C YLR361C-AQ3E795 98 aa3.35□□□□□ -1.87
CDC42YLR229C ECM12O13529 151 aa3.34□□□□□ -1.87
CDC42YLR229C YHR139C-AO13536 103 aa3.34□□□□□ -1.87
CDC42YLR229C SHU1P38751 150 aa3.34□□□□□ -1.87
CDC42YLR229C YAR029WP39549 74 aa3.34□□□□□ -1.87
CDC42YLR229C VTC1P40046 129 aaRIP-Chip data3.34□□□□□ -1.87not detected
CDC42YLR229C SIM1P40472 476 aa3.34□□□□□ -1.87
CDC42YLR229C CWP2P43497 92 aa3.34□□□□□ -1.87
CDC42YLR229C VPS55P47111 140 aa3.34□□□□□ -1.87
CDC42YLR229C SPG4Q04438 115 aa3.34□□□□□ -1.87
CDC42YLR229C PBA1Q05778 276 aa3.34□□□□□ -1.87
CDC42YLR229C CCW12Q12127 133 aa3.34□□□□□ -1.87
CDC42YLR229C YDL022C-AP0C5L6 82 aa3.33□□□□□ -1.88
CDC42YLR229C YCR043CP25361 127 aa3.33□□□□□ -1.88
CDC42YLR229C RPB9P27999 122 aa3.33□□□□□ -1.88
CDC42YLR229C TOM6P33448 61 aa3.33□□□□□ -1.88
CDC42YLR229C YHR022CP38763 256 aa3.33□□□□□ -1.88
CDC42YLR229C MPC2P38857 129 aa3.33□□□□□ -1.88
CDC42YLR229C YJR146WP47174 117 aa3.33□□□□□ -1.88
CDC42YLR229C TOS8P53147 276 aa3.33□□□□□ -1.88
CDC42YLR229C HOR7Q05827 59 aa3.33□□□□□ -1.88
CDC42YLR229C YBR200W-AQ3E755 54 aa3.33□□□□□ -1.88
CDC42YLR229C STF1P01098 86 aa3.32□□□□□ -1.88
CDC42YLR229C CUP1-1P0CX80 61 aa3.32□□□□□ -1.88
CDC42YLR229C CUP1-2P0CX81 61 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms