RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YPR145C-AQ2V2P0 78 aa1.86□□□□□ -2.11
CSF1YLR087C RPS11AP0CX47 156 aaKnown RBP1.86□□□□□ -2.11
CSF1YLR087C RPS11BP0CX48 156 aaKnown RBP1.86□□□□□ -2.11
CSF1YLR087C LPP1Q04396 274 aa1.86□□□□□ -2.11
CSF1YLR087C YDR381C-AQ3E6R5 114 aa1.86□□□□□ -2.11
CSF1YLR087C MID2P36027 376 aa1.86□□□□□ -2.11
CSF1YLR087C YMR254CQ04838 102 aa1.86□□□□□ -2.11
CSF1YLR087C PGU1P47180 361 aa1.86□□□□□ -2.11
CSF1YLR087C BNS1P50084 137 aa1.86□□□□□ -2.11
CSF1YLR087C ATP20Q12233 115 aa1.86□□□□□ -2.11
CSF1YLR087C RDL1Q12305 139 aaKnown RBP1.86□□□□□ -2.11
CSF1YLR087C YBL008W-AQ3E821 79 aa1.86□□□□□ -2.11
CSF1YLR087C YPS5P53057 165 aa1.85□□□□□ -2.11
CSF1YLR087C BSC1Q12140 328 aa1.85□□□□□ -2.11
CSF1YLR087C YDL022C-AP0C5L6 82 aa1.85□□□□□ -2.11
CSF1YLR087C YHR173CP38864 112 aa1.85□□□□□ -2.11
CSF1YLR087C YMR321CQ04898 105 aa1.85□□□□□ -2.11
CSF1YLR087C RLM1Q12224 676 aa1.85□□□□□ -2.11
CSF1YLR087C YLR012CQ07927 99 aa1.85□□□□□ -2.11
CSF1YLR087C RDL2Q08742 149 aaKnown RBP1.85□□□□□ -2.11
CSF1YLR087C YGL258W-AQ3E740 77 aa1.85□□□□□ -2.11
CSF1YLR087C YMR175W-AQ3E766 64 aa1.85□□□□□ -2.11
CSF1YLR087C DSS4P32601 143 aa1.85□□□□□ -2.11
CSF1YLR087C PRE3P38624 215 aa1.85□□□□□ -2.11
CSF1YLR087C FSH2Q05015 223 aa1.85□□□□□ -2.11
CSF1YLR087C RPS10AQ08745 105 aaPredicted RBP1.85□□□□□ -2.11
CSF1YLR087C YBR230W-AQ3E762 66 aa1.85□□□□□ -2.11
CSF1YLR087C HRT1Q08273 121 aa1.84□□□□□ -2.11
CSF1YLR087C RPL2AP0CX45 254 aaKnown RBP1.84□□□□□ -2.11
CSF1YLR087C RPL2BP0CX46 254 aaKnown RBP1.84□□□□□ -2.11
CSF1YLR087C YFL015CP43578 164 aa1.84□□□□□ -2.11
CSF1YLR087C UBC9P50623 157 aaPredicted RBP1.84□□□□□ -2.11
CSF1YLR087C TSA2Q04120 196 aa1.84□□□□□ -2.11
CSF1YLR087C IRC21Q04772 201 aa1.84□□□□□ -2.11
CSF1YLR087C YKR045CP36138 183 aa1.84□□□□□ -2.11
CSF1YLR087C YGR018CP53211 109 aa1.84□□□□□ -2.11
CSF1YLR087C USV1Q12132 391 aa1.84□□□□□ -2.11
CSF1YLR087C YOR032W-AQ8TGS1 66 aa1.84□□□□□ -2.11
CSF1YLR087C YAR023CD6VPM8 179 aa1.84□□□□□ -2.12
CSF1YLR087C HSP12P22943 109 aaKnown RBP1.84□□□□□ -2.12
CSF1YLR087C COA4Q05809 96 aa1.84□□□□□ -2.12
CSF1YLR087C YLR122CQ12312 125 aa1.84□□□□□ -2.12
CSF1YLR087C SPS100P13130 326 aa1.84□□□□□ -2.12
CSF1YLR087C YLR146W-AQ2V2P1 62 aa1.84□□□□□ -2.12
CSF1YLR087C YBR013CP38215 129 aa1.84□□□□□ -2.12
CSF1YLR087C YJL197C-AP0C5P0 93 aa1.83□□□□□ -2.12
CSF1YLR087C ISF1P32488 338 aa1.83□□□□□ -2.12
CSF1YLR087C PIR5P46999 287 aa1.83□□□□□ -2.12
CSF1YLR087C SIM1P40472 476 aa1.83□□□□□ -2.12
CSF1YLR087C ARC15P40518 154 aaRIP-Chip data1.83□□□□□ -2.12not detected
CSF1YLR087C YFL012WP43580 148 aa1.83□□□□□ -2.12
CSF1YLR087C YNL190WP53872 204 aa1.83□□□□□ -2.12
CSF1YLR087C YPR011CQ12251 326 aa1.83□□□□□ -2.12
CSF1YLR087C WWM1P43582 211 aaKnown RBP1.83□□□□□ -2.12
CSF1YLR087C TIM8P57744 87 aa1.83□□□□□ -2.12
CSF1YLR087C YDR114CQ04597 100 aa1.83□□□□□ -2.12
CSF1YLR087C YDR461C-AQ2V2P7 80 aa1.83□□□□□ -2.12
CSF1YLR087C RPL42AP0CX27 106 aaKnown RBP1.83□□□□□ -2.12
CSF1YLR087C RPL42BP0CX28 106 aaKnown RBP1.83□□□□□ -2.12
CSF1YLR087C BSC4P53841 131 aa1.83□□□□□ -2.12
CSF1YLR087C PCP1P53259 346 aa1.83□□□□□ -2.12
CSF1YLR087C DAD1Q12248 94 aa1.83□□□□□ -2.12
CSF1YLR087C YHR214C-DP0CX93 97 aa1.83□□□□□ -2.12
CSF1YLR087C RFA2P26754 273 aaKnown RBP1.83□□□□□ -2.12
CSF1YLR087C YIL163CP40448 117 aa1.83□□□□□ -2.12
CSF1YLR087C LST8P41318 303 aa1.83□□□□□ -2.12
CSF1YLR087C BRP1P53194 125 aa1.83□□□□□ -2.12
CSF1YLR087C NAS2P40555 220 aa1.82□□□□□ -2.12
CSF1YLR087C HOR7Q05827 59 aa1.82□□□□□ -2.12
CSF1YLR087C LCL2Q08045 131 aa1.82□□□□□ -2.12
CSF1YLR087C YIL134C-AQ45U18 67 aa1.82□□□□□ -2.12
CSF1YLR087C TDA2P40045 126 aa1.82□□□□□ -2.12
CSF1YLR087C CUZ1P53899 274 aa1.82□□□□□ -2.12
CSF1YLR087C YLR042CQ07990 161 aa1.82□□□□□ -2.12
CSF1YLR087C YHR213WP0CI67 198 aa1.82□□□□□ -2.12
CSF1YLR087C LIP1Q03579 150 aa1.82□□□□□ -2.12
CSF1YLR087C YAL063C-AQ3E791 96 aa1.82□□□□□ -2.12
CSF1YLR087C IRC13Q08630 104 aa1.82□□□□□ -2.12
CSF1YLR087C QRI5P32344 111 aa1.82□□□□□ -2.12
CSF1YLR087C RPS14BP39516 138 aaKnown RBP1.82□□□□□ -2.12
CSF1YLR087C NIP7Q08962 181 aaKnown RBP1.82□□□□□ -2.12
CSF1YLR087C YKL097CP34245 136 aa1.81□□□□□ -2.12
CSF1YLR087C YML100W-AQ8TGT0 57 aa1.81□□□□□ -2.12
CSF1YLR087C MBB1P39534 108 aa1.81□□□□□ -2.12
CSF1YLR087C PIR1Q03178 341 aa1.81□□□□□ -2.12
CSF1YLR087C PBA1Q05778 276 aa1.81□□□□□ -2.12
CSF1YLR087C YCR024C-BQ3E7Z8 88 aa1.81□□□□□ -2.12
CSF1YLR087C PET8P38921 284 aa1.81□□□□□ -2.12
CSF1YLR087C YPL278CQ08990 100 aa1.81□□□□□ -2.12
CSF1YLR087C ECM19Q06011 112 aa1.81□□□□□ -2.12
CSF1YLR087C QCR10P37299 77 aa1.81□□□□□ -2.12
CSF1YLR087C MIX17Q03667 156 aa1.81□□□□□ -2.12
CSF1YLR087C YLR236CA0A023PZG4 107 aa1.81□□□□□ -2.12
CSF1YLR087C YJR107C-AP0CT86 78 aa1.81□□□□□ -2.12
CSF1YLR087C YLR194CQ05777 254 aa1.81□□□□□ -2.12
CSF1YLR087C AGA1P32323 725 aa1.8□□□□□ -2.12
CSF1YLR087C IGD1P43598 195 aa1.8□□□□□ -2.12
CSF1YLR087C TDA7P53882 636 aaPredicted RBP1.8□□□□□ -2.12
CSF1YLR087C NTF2P33331 125 aaKnown RBP1.8□□□□□ -2.12
CSF1YLR087C URM1P40554 99 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms