RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W RPB9P27999 122 aa2.65□□□□□ -1.99
BCD1YHR040W YKR070WP36151 352 aaKnown RBP2.65□□□□□ -1.99
BCD1YHR040W SNU13P39990 126 aaKnown RBP2.65□□□□□ -1.99
BCD1YHR040W YER076CP40049 302 aa2.65□□□□□ -1.99
BCD1YHR040W SPI1P40092 148 aa2.65□□□□□ -1.99
BCD1YHR040W YNL200CP40165 246 aaKnown RBP2.65□□□□□ -1.99
BCD1YHR040W YJL028WP47062 111 aa2.65□□□□□ -1.99
BCD1YHR040W MMS2P53152 137 aa2.65□□□□□ -1.99
BCD1YHR040W YGR017WP53210 297 aa2.65□□□□□ -1.99
BCD1YHR040W VPS71Q03433 280 aa2.65□□□□□ -1.99
BCD1YHR040W PKR1Q03880 122 aaKnown RBP2.65□□□□□ -1.99
BCD1YHR040W IRC23Q08416 157 aa2.65□□□□□ -1.99
BCD1YHR040W YLR363W-AQ3E747 85 aa2.65□□□□□ -1.99
BCD1YHR040W YCR043CP25361 127 aa2.64□□□□□ -1.99
BCD1YHR040W GLE2P40066 365 aa2.64□□□□□ -1.99
BCD1YHR040W HUA1P40325 198 aa2.64□□□□□ -1.99
BCD1YHR040W FCF1Q05498 189 aaPredicted RBP2.64□□□□□ -1.99
BCD1YHR040W YOR008C-AQ3E7B9 74 aa2.64□□□□□ -1.99
BCD1YHR040W CCW14O13547 238 aa2.63□□□□□ -1.99
BCD1YHR040W VAR1P02381 398 aa2.63□□□□□ -1.99
BCD1YHR040W RPS8AP0CX39 200 aaKnown RBP2.63□□□□□ -1.99
BCD1YHR040W RPS8BP0CX40 200 aaKnown RBP2.63□□□□□ -1.99
BCD1YHR040W PRY2P36110 329 aa2.63□□□□□ -1.99
BCD1YHR040W YHR022CP38763 256 aa2.63□□□□□ -1.99
BCD1YHR040W RPF1P38805 295 aaKnown RBP2.63□□□□□ -1.99
BCD1YHR040W YIL014C-AQ02598 104 aa2.63□□□□□ -1.99
BCD1YHR040W YMR103CQ04436 120 aa2.63□□□□□ -1.99
BCD1YHR040W YCL021W-AQ96VH3 125 aa2.63□□□□□ -1.99
BCD1YHR040W Q0255P03881 472 aa2.62□□□□□ -1.99
BCD1YHR040W YKR032WP36127 104 aa2.62□□□□□ -1.99
BCD1YHR040W YNL217WP40152 326 aa2.62□□□□□ -1.99
BCD1YHR040W YPL073CP40323 161 aa2.62□□□□□ -1.99
BCD1YHR040W AIM34Q03673 198 aa2.62□□□□□ -1.99
BCD1YHR040W YOR097CQ12274 175 aaPredicted RBP2.62□□□□□ -1.99
BCD1YHR040W YKL023C-AQ2V2P3 75 aa2.62□□□□□ -1.99
BCD1YHR040W YER078W-AQ3E7A2 54 aa2.62□□□□□ -1.99
BCD1YHR040W YCR075W-AQ3E830 75 aa2.62□□□□□ -1.99
BCD1YHR040W SCS22Q6Q595 175 aa2.62□□□□□ -1.99
BCD1YHR040W RPL2AP0CX45 254 aaKnown RBP2.61□□□□□ -1.99
BCD1YHR040W RPL2BP0CX46 254 aaKnown RBP2.61□□□□□ -1.99
BCD1YHR040W HMRA2P0CY13 119 aa2.61□□□□□ -1.99
BCD1YHR040W ECM33P38248 429 aaKnown RBP2.61□□□□□ -1.99
BCD1YHR040W MPC2P38857 129 aa2.61□□□□□ -1.99
BCD1YHR040W ELC1Q03071 99 aa2.61□□□□□ -1.99
BCD1YHR040W MRPS8Q03799 155 aa2.61□□□□□ -1.99
BCD1YHR040W YBR200W-AQ3E755 54 aa2.61□□□□□ -1.99
BCD1YHR040W YOR011W-AQ3E807 68 aa2.61□□□□□ -1.99
BCD1YHR040W PAI3P01094 68 aa2.6□□□□□ -1.99
BCD1YHR040W ARO2P28777 376 aaKnown RBP2.6□□□□□ -1.99
BCD1YHR040W YAR029WP39549 74 aa2.6□□□□□ -1.99
BCD1YHR040W YER135CP40082 130 aa2.6□□□□□ -1.99
BCD1YHR040W YER181CP40097 107 aa2.6□□□□□ -1.99
BCD1YHR040W DCV1P43595 202 aa2.6□□□□□ -1.99
BCD1YHR040W YMR244WQ04018 355 aa2.6□□□□□ -1.99
BCD1YHR040W PBA1Q05778 276 aa2.6□□□□□ -1.99
BCD1YHR040W YLR296WQ05898 108 aa2.6□□□□□ -1.99
BCD1YHR040W DGA1Q08650 418 aa2.6□□□□□ -1.99
BCD1YHR040W PPT2Q12036 173 aa2.6□□□□□ -1.99
BCD1YHR040W PRM7Q12459 698 aa2.6□□□□□ -1.99
BCD1YHR040W DFM1Q12743 341 aaKnown RBP2.6□□□□□ -1.99
BCD1YHR040W YIL102C-AQ2V2P5 75 aa2.6□□□□□ -1.99
BCD1YHR040W IGO2Q9P305 131 aa2.6□□□□□ -1.99
BCD1YHR040W MBF1O14467 151 aaKnown RBP2.59□□□□□ -1.99
BCD1YHR040W YPR170W-BP0C5R9 85 aa2.59□□□□□ -1.99
BCD1YHR040W RPS11AP0CX47 156 aaKnown RBP2.59□□□□□ -1.99
BCD1YHR040W RPS11BP0CX48 156 aaKnown RBP2.59□□□□□ -1.99
BCD1YHR040W POP7P38291 140 aa2.59□□□□□ -1.99
BCD1YHR040W PEX17P40155 199 aa2.59□□□□□ -1.99
BCD1YHR040W CAX4P53223 239 aa2.59□□□□□ -1.99
BCD1YHR040W ERI1P62651 68 aaKnown RBP2.59□□□□□ -1.99
BCD1YHR040W PMP3P87284 55 aa2.59□□□□□ -1.99
BCD1YHR040W MSA1Q08471 629 aa2.59□□□□□ -1.99
BCD1YHR040W YPL261CQ08976 102 aa2.59□□□□□ -1.99
BCD1YHR040W COA3Q3E7B2 85 aa2.59□□□□□ -1.99
BCD1YHR040W YPL229WQ99395 206 aa2.59□□□□□ -1.99
BCD1YHR040W QCR8P08525 94 aa2.58□□□□□ -2
BCD1YHR040W PRE1P22141 198 aaKnown RBP2.58□□□□□ -2
BCD1YHR040W HYP2P23301 157 aaKnown RBP2.58□□□□□ -2
BCD1YHR040W MIG1P27705 504 aa2.58□□□□□ -2
BCD1YHR040W YKR041WP36134 250 aa2.58□□□□□ -2
BCD1YHR040W MIG3P39943 394 aa2.58□□□□□ -2
BCD1YHR040W OXA1P39952 402 aa2.58□□□□□ -2
BCD1YHR040W ABF2Q02486 183 aa2.58□□□□□ -2
BCD1YHR040W YLR042CQ07990 161 aa2.58□□□□□ -2
BCD1YHR040W YGR035W-AQ45U48 73 aa2.58□□□□□ -2
BCD1YHR040W YBR056W-AI2HB52 66 aa2.57□□□□□ -2
BCD1YHR040W AIM11P87275 137 aa2.57□□□□□ -2
BCD1YHR040W YLR194CQ05777 254 aa2.57□□□□□ -2
BCD1YHR040W YPR013CQ12145 317 aa2.57□□□□□ -2
BCD1YHR040W YGR240C-AQ3E786 66 aa2.57□□□□□ -2
BCD1YHR040W YAL063C-AQ3E791 96 aa2.57□□□□□ -2
BCD1YHR040W MDN1Q12019 4910 aaKnown RBP2.56□□□□□ -2
BCD1YHR040W YPR010C-AA5Z2X5 72 aa2.56□□□□□ -2
BCD1YHR040W YHR212W-AP0CX91 67 aa2.56□□□□□ -2
BCD1YHR040W NHP2P32495 156 aaPredicted RBP2.56□□□□□ -2
BCD1YHR040W RRT13P40042 185 aa2.56□□□□□ -2
BCD1YHR040W AGE2P40529 298 aa2.56□□□□□ -2
BCD1YHR040W YJR146WP47174 117 aa2.56□□□□□ -2
BCD1YHR040W YDR115WQ04598 105 aa2.56□□□□□ -2
BCD1YHR040W SCW10Q04951 389 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms