RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W RPL11BQ3E757 174 aaPredicted RBP4.72□□□□□ -1.65
SKN1YGR143W YPR096CO13587 100 aa4.71□□□□□ -1.66
SKN1YGR143W RPL23AP0CX41 137 aaKnown RBP4.71□□□□□ -1.66
SKN1YGR143W RPL23BP0CX42 137 aaKnown RBP4.71□□□□□ -1.66
SKN1YGR143W APS1P35181 156 aa4.71□□□□□ -1.66
SKN1YGR143W YOL160WQ08321 113 aa4.71□□□□□ -1.66
SKN1YGR143W YLR112WQ12130 139 aa4.71□□□□□ -1.66
SKN1YGR143W RPS27AP35997 82 aaKnown RBP4.71□□□□□ -1.66
SKN1YGR143W RPS27BP38711 82 aa4.71□□□□□ -1.66
SKN1YGR143W LST8P41318 303 aa4.71□□□□□ -1.66
SKN1YGR143W TDA8Q6B2U8 126 aa4.71□□□□□ -1.66
SKN1YGR143W FAS1P07149 2051 aaKnown RBP4.7□□□□□ -1.66
SKN1YGR143W MIX14Q04341 121 aa4.7□□□□□ -1.66
SKN1YGR143W NCE102Q12207 173 aaRIP-Chip data4.7□□□□□ -1.66not detected
SKN1YGR143W YDL009CQ12210 107 aa4.7□□□□□ -1.66
SKN1YGR143W TSC3Q3E790 80 aa4.7□□□□□ -1.66
SKN1YGR143W YMR007WQ03675 126 aa4.69□□□□□ -1.66
SKN1YGR143W YDL211CQ12121 372 aa4.69□□□□□ -1.66
SKN1YGR143W PRP8P33334 2413 aaKnown RBP4.69□□□□□ -1.66
SKN1YGR143W YFR035CP43608 114 aa4.69□□□□□ -1.66
SKN1YGR143W ICY1Q04329 127 aa4.69□□□□□ -1.66
SKN1YGR143W RNH203Q12338 110 aa4.69□□□□□ -1.66
SKN1YGR143W HTL1Q9URQ5 78 aa4.69□□□□□ -1.66
SKN1YGR143W QCR9P22289 66 aa4.68□□□□□ -1.66
SKN1YGR143W SIM1P40472 476 aa4.68□□□□□ -1.66
SKN1YGR143W PGU1P47180 361 aa4.68□□□□□ -1.66
SKN1YGR143W YLR365WQ7LIF2 110 aa4.68□□□□□ -1.66
SKN1YGR143W ROX3P25046 220 aa4.68□□□□□ -1.66
SKN1YGR143W LDB16P25587 256 aa4.68□□□□□ -1.66
SKN1YGR143W YSY6P38374 65 aa4.68□□□□□ -1.66
SKN1YGR143W USV1Q12132 391 aa4.68□□□□□ -1.66
SKN1YGR143W SPS100P13130 326 aa4.67□□□□□ -1.66
SKN1YGR143W ERG2P32352 222 aa4.67□□□□□ -1.66
SKN1YGR143W YEL067CP39978 195 aa4.67□□□□□ -1.66
SKN1YGR143W ICS3P47034 131 aa4.67□□□□□ -1.66
SKN1YGR143W UBC13P52490 153 aa4.67□□□□□ -1.66
SKN1YGR143W IRC23Q08416 157 aa4.67□□□□□ -1.66
SKN1YGR143W HSP12P22943 109 aaKnown RBP4.67□□□□□ -1.66
SKN1YGR143W YBR209WP38311 105 aa4.67□□□□□ -1.66
SKN1YGR143W YGR269WP40326 108 aa4.67□□□□□ -1.66
SKN1YGR143W YPI1P43587 155 aa4.67□□□□□ -1.66
SKN1YGR143W RPL11AP0C0W9 174 aaKnown RBP4.66□□□□□ -1.66
SKN1YGR143W RPB9P27999 122 aa4.66□□□□□ -1.66
SKN1YGR143W YFL051CP43552 160 aa4.66□□□□□ -1.66
SKN1YGR143W YMR295CQ03559 197 aa4.66□□□□□ -1.66
SKN1YGR143W YIA6P40556 373 aa4.66□□□□□ -1.66
SKN1YGR143W RPL15AP05748 204 aaKnown RBP4.65□□□□□ -1.66
SKN1YGR143W YKR045CP36138 183 aa4.65□□□□□ -1.66
SKN1YGR143W RPL15BP54780 204 aaPredicted RBP4.65□□□□□ -1.66
SKN1YGR143W YGL260WP53056 76 aa4.64□□□□□ -1.67
SKN1YGR143W YNR077CP53758 84 aa4.64□□□□□ -1.67
SKN1YGR143W YMR181CQ03231 154 aa4.64□□□□□ -1.67
SKN1YGR143W YBR144CP34215 104 aa4.64□□□□□ -1.67
SKN1YGR143W YGL193CP53097 103 aa4.64□□□□□ -1.67
SKN1YGR143W YGL088WP53151 121 aa4.64□□□□□ -1.67
SKN1YGR143W YDR274CP87283 123 aa4.64□□□□□ -1.67
SKN1YGR143W YHR214C-EQ8TGK0 99 aa4.64□□□□□ -1.67
SKN1YGR143W PFY1P07274 126 aa4.63□□□□□ -1.67
SKN1YGR143W RSM18P40033 138 aa4.63□□□□□ -1.67
SKN1YGR143W TDA2P40045 126 aa4.63□□□□□ -1.67
SKN1YGR143W YML100W-AQ8TGT0 57 aa4.63□□□□□ -1.67
SKN1YGR143W MEC1P38111 2368 aa4.63□□□□□ -1.67
SKN1YGR143W YHR214C-DP0CX93 97 aa4.63□□□□□ -1.67
SKN1YGR143W YEL045CP32616 141 aa4.63□□□□□ -1.67
SKN1YGR143W YHR173CP38864 112 aa4.63□□□□□ -1.67
SKN1YGR143W YAL064WP39711 94 aa4.63□□□□□ -1.67
SKN1YGR143W YOR192C-CQ3E736 78 aa4.63□□□□□ -1.67
SKN1YGR143W RPS8AP0CX39 200 aaKnown RBP4.62□□□□□ -1.67
SKN1YGR143W RPS8BP0CX40 200 aaKnown RBP4.62□□□□□ -1.67
SKN1YGR143W HNT2P49775 206 aa4.62□□□□□ -1.67
SKN1YGR143W PPT2Q12036 173 aa4.62□□□□□ -1.67
SKN1YGR143W YDR246W-AQ3E763 66 aa4.62□□□□□ -1.67
SKN1YGR143W ARF1P11076 181 aaKnown RBP4.61□□□□□ -1.67
SKN1YGR143W PBA1Q05778 276 aa4.61□□□□□ -1.67
SKN1YGR143W FLO9P39712 1322 aa4.61□□□□□ -1.67
SKN1YGR143W YHR180WP38868 163 aa4.61□□□□□ -1.67
SKN1YGR143W GLT1Q12680 2145 aaKnown RBP4.61□□□□□ -1.67
SKN1YGR143W RPL26AP05743 127 aaKnown RBP4.6□□□□□ -1.67
SKN1YGR143W YDL022C-AP0C5L6 82 aa4.6□□□□□ -1.67
SKN1YGR143W YPS5P53057 165 aa4.6□□□□□ -1.67
SKN1YGR143W ERI1P62651 68 aaKnown RBP4.6□□□□□ -1.67
SKN1YGR143W SPG4Q04438 115 aa4.6□□□□□ -1.67
SKN1YGR143W YPR053CQ6Q5F3 151 aa4.6□□□□□ -1.67
SKN1YGR143W BPH1P25356 2167 aa4.6□□□□□ -1.67
SKN1YGR143W YSF3P0C074 85 aaPredicted RBP4.6□□□□□ -1.67
SKN1YGR143W PET8P38921 284 aa4.6□□□□□ -1.67
SKN1YGR143W HUA1P40325 198 aa4.6□□□□□ -1.67
SKN1YGR143W YGR050CP53231 118 aa4.6□□□□□ -1.67
SKN1YGR143W PCP1P53259 346 aa4.6□□□□□ -1.67
SKN1YGR143W YML122CQ03207 126 aa4.6□□□□□ -1.67
SKN1YGR143W YOR381W-AQ3E804 55 aa4.6□□□□□ -1.67
SKN1YGR143W YBR182C-AQ8TGU6 64 aa4.6□□□□□ -1.67
SKN1YGR143W DDR48P18899 430 aaKnown RBP4.59□□□□□ -1.67
SKN1YGR143W VTC1P40046 129 aaRIP-Chip data4.59□□□□□ -1.67not detected
SKN1YGR143W AIM19P40502 157 aa4.59□□□□□ -1.67
SKN1YGR143W HHF1P02309 103 aaKnown RBP4.58□□□□□ -1.68
SKN1YGR143W AIM4P38305 123 aaPredicted RBP4.58□□□□□ -1.68
SKN1YGR143W HUR1P45820 110 aa4.58□□□□□ -1.68
SKN1YGR143W ATP19P81451 68 aa4.57□□□□□ -1.68
SKN1YGR143W RPL32P38061 130 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms