RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C YJR146WP47174 117 aa8.06□□□□□ -1.12
CCA1YER168C YLR042CQ07990 161 aa8.06□□□□□ -1.12
CCA1YER168C HYP2P23301 157 aaKnown RBP8.05□□□□□ -1.12
CCA1YER168C RPL16AP26784 199 aaKnown RBP8.05□□□□□ -1.12
CCA1YER168C VTC1P40046 129 aaRIP-Chip data8.05□□□□□ -1.12not detected
CCA1YER168C YFR057WP43625 151 aa8.05□□□□□ -1.12
CCA1YER168C RUB1Q03919 77 aa8.05□□□□□ -1.12
CCA1YER168C MRPL23Q12487 163 aaPredicted RBP8.05□□□□□ -1.12
CCA1YER168C SCW10Q04951 389 aa8.04□□□□□ -1.12
CCA1YER168C RPS8AP0CX39 200 aaKnown RBP8.03□□□□□ -1.12
CCA1YER168C RPS8BP0CX40 200 aaKnown RBP8.03□□□□□ -1.12
CCA1YER168C ATP15P21306 62 aa8.03□□□□□ -1.12
CCA1YER168C IGO2Q9P305 131 aa8.03□□□□□ -1.12
CCA1YER168C YER181CP40097 107 aa8.03□□□□□ -1.12
CCA1YER168C CPR1P14832 162 aaKnown RBP8.02□□□□□ -1.13
CCA1YER168C AIM29P36154 155 aa8.02□□□□□ -1.13
CCA1YER168C RRT13P40042 185 aa8.02□□□□□ -1.13
CCA1YER168C YOR097CQ12274 175 aaPredicted RBP8.02□□□□□ -1.13
CCA1YER168C ADH1P00330 348 aaKnown RBP8.01□□□□□ -1.13
CCA1YER168C CIN5P40917 295 aa8.01□□□□□ -1.13
CCA1YER168C YNL217WP40152 326 aa8□□□□□ -1.13
CCA1YER168C YIL002W-AQ3E7Z5 69 aa8□□□□□ -1.13
CCA1YER168C CDC43P18898 376 aa8□□□□□ -1.13
CCA1YER168C YLR194CQ05777 254 aa8□□□□□ -1.13
CCA1YER168C RPL15AP05748 204 aaKnown RBP7.99□□□□□ -1.13
CCA1YER168C VHS2P40463 436 aa7.99□□□□□ -1.13
CCA1YER168C CCW14O13547 238 aa7.97□□□□□ -1.13
CCA1YER168C TRP1P00912 224 aa7.97□□□□□ -1.13
CCA1YER168C ARO2P28777 376 aaKnown RBP7.97□□□□□ -1.13
CCA1YER168C YER085CP40058 173 aa7.97□□□□□ -1.13
CCA1YER168C ALG13P53178 202 aa7.97□□□□□ -1.13
CCA1YER168C YPT53P36019 220 aa7.96□□□□□ -1.13
CCA1YER168C AGE2P40529 298 aa7.96□□□□□ -1.13
CCA1YER168C YCH1P42937 148 aa7.96□□□□□ -1.14
CCA1YER168C YGL088WP53151 121 aa7.96□□□□□ -1.14
CCA1YER168C RPL28P02406 149 aaKnown RBP7.95□□□□□ -1.14
CCA1YER168C YBR209WP38311 105 aa7.95□□□□□ -1.14
CCA1YER168C MRPS12P53732 153 aa7.95□□□□□ -1.14
CCA1YER168C RPL2AP0CX45 254 aaKnown RBP7.94□□□□□ -1.14
CCA1YER168C RPL2BP0CX46 254 aaKnown RBP7.94□□□□□ -1.14
CCA1YER168C RPL18AP0CX49 186 aaKnown RBP7.94□□□□□ -1.14
CCA1YER168C RPL18BP0CX50 186 aaKnown RBP7.94□□□□□ -1.14
CCA1YER168C YHR212W-AP0CX91 67 aa7.94□□□□□ -1.14
CCA1YER168C TOR1P35169 2470 aa7.94□□□□□ -1.14
CCA1YER168C RPS11AP0CX47 156 aaKnown RBP7.93□□□□□ -1.14
CCA1YER168C RPS11BP0CX48 156 aaKnown RBP7.93□□□□□ -1.14
CCA1YER168C POP7P38291 140 aa7.93□□□□□ -1.14
CCA1YER168C YEL008WP40001 126 aa7.93□□□□□ -1.14
CCA1YER168C PEX17P40155 199 aa7.93□□□□□ -1.14
CCA1YER168C LSM6Q06406 86 aaKnown RBP7.93□□□□□ -1.14
CCA1YER168C YPL257WQ08974 193 aa7.92□□□□□ -1.14
CCA1YER168C SLO1Q3E784 85 aa7.92□□□□□ -1.14
CCA1YER168C YNL190WP53872 204 aa7.92□□□□□ -1.14
CCA1YER168C UGX2P32772 223 aa7.91□□□□□ -1.14
CCA1YER168C MID2P36027 376 aa7.91□□□□□ -1.14
CCA1YER168C UBC5P15732 148 aa7.9□□□□□ -1.14
CCA1YER168C MPC2P38857 129 aa7.9□□□□□ -1.14
CCA1YER168C MET32Q12041 191 aa7.9□□□□□ -1.14
CCA1YER168C NHP2P32495 156 aaPredicted RBP7.89□□□□□ -1.15
CCA1YER168C SHU1P38751 150 aa7.89□□□□□ -1.15
CCA1YER168C YIL059CP40520 121 aa7.89□□□□□ -1.15
CCA1YER168C YPS5P53057 165 aa7.89□□□□□ -1.15
CCA1YER168C PMP3P87284 55 aa7.89□□□□□ -1.15
CCA1YER168C YCL021W-AQ96VH3 125 aa7.89□□□□□ -1.15
CCA1YER168C SOH1P38633 127 aa7.87□□□□□ -1.15
CCA1YER168C KRE9P39005 276 aa7.87□□□□□ -1.15
CCA1YER168C CYC7P00045 113 aa7.86□□□□□ -1.15
CCA1YER168C VTS1Q08831 523 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
CCA1YER168C YDL186WP48568 277 aa7.85□□□□□ -1.15
CCA1YER168C RTG1P32607 177 aa7.85□□□□□ -1.15
CCA1YER168C YBR144CP34215 104 aa7.84□□□□□ -1.15
CCA1YER168C QCR8P08525 94 aa7.83□□□□□ -1.16
CCA1YER168C CUP1-1P0CX80 61 aa7.82□□□□□ -1.16
CCA1YER168C CUP1-2P0CX81 61 aa7.82□□□□□ -1.16
CCA1YER168C DUT1P33317 147 aa7.82□□□□□ -1.16
CCA1YER168C ARC15P40518 154 aaRIP-Chip data7.82□□□□□ -1.16not detected
CCA1YER168C OST2P46964 130 aa7.82□□□□□ -1.16
CCA1YER168C YDR274CP87283 123 aa7.82□□□□□ -1.16
CCA1YER168C HPA2Q06592 156 aa7.82□□□□□ -1.16
CCA1YER168C AIR2Q12476 344 aaKnown RBP7.81□□□□□ -1.16
CCA1YER168C YMR295CQ03559 197 aa7.81□□□□□ -1.16
CCA1YER168C YBR219CP38317 127 aa7.8□□□□□ -1.16
CCA1YER168C ATX1P38636 73 aa7.8□□□□□ -1.16
CCA1YER168C NRG2P38082 220 aa7.78□□□□□ -1.16
CCA1YER168C YBR126W-AQ8TGU7 68 aa7.78□□□□□ -1.16
CCA1YER168C YCR075W-AQ3E830 75 aa7.78□□□□□ -1.16
CCA1YER168C YCR001WP25347 104 aa7.77□□□□□ -1.17
CCA1YER168C RPA12P32529 125 aaKnown RBP7.77□□□□□ -1.17
CCA1YER168C YAR029WP39549 74 aa7.77□□□□□ -1.17
CCA1YER168C YIA6P40556 373 aa7.77□□□□□ -1.17
CCA1YER168C MSN1P22148 382 aa7.76□□□□□ -1.17
CCA1YER168C YHR130CP38834 111 aa7.76□□□□□ -1.17
CCA1YER168C YMR122W-AQ3E842 84 aa7.76□□□□□ -1.17
CCA1YER168C YGR035W-AQ45U48 73 aa7.76□□□□□ -1.17
CCA1YER168C COX14P39103 70 aa7.75□□□□□ -1.17
CCA1YER168C YGR240C-AQ3E786 66 aa7.75□□□□□ -1.17
CCA1YER168C INO4P13902 151 aa7.74□□□□□ -1.17
CCA1YER168C COX10P21592 462 aa7.74□□□□□ -1.17
CCA1YER168C MLF3P32047 452 aa7.74□□□□□ -1.17
CCA1YER168C COX12Q01519 83 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms