RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C VMA21P41806 77 aa1.98□□□□□ -2.09
VPS3YDR495C YHR007C-AQ07074 71 aa1.98□□□□□ -2.09
VPS3YDR495C PAU24P38155 120 aa1.98□□□□□ -2.09
VPS3YDR495C HRT1Q08273 121 aa1.98□□□□□ -2.09
VPS3YDR495C TY2B-BQ12491 1770 aa1.97□□□□□ -2.09
VPS3YDR495C YBT1P32386 1661 aa1.97□□□□□ -2.09
VPS3YDR495C RPL22BP56628 122 aaKnown RBP1.97□□□□□ -2.09
VPS3YDR495C SEN15Q04675 128 aa1.97□□□□□ -2.09
VPS3YDR495C EMC6Q12431 108 aa1.97□□□□□ -2.09
VPS3YDR495C ECM12O13529 151 aa1.97□□□□□ -2.09
VPS3YDR495C RSM19P53733 91 aaPredicted RBP1.97□□□□□ -2.09
VPS3YDR495C TY1B-JR2P47100 1755 aaKnown RBP1.96□□□□□ -2.09
VPS3YDR495C TY1B-ER2Q03619 1755 aa1.96□□□□□ -2.09
VPS3YDR495C TY1B-MR1Q04214 1755 aa1.96□□□□□ -2.09
VPS3YDR495C TY1B-MR2Q04670 1755 aaKnown RBP1.96□□□□□ -2.09
VPS3YDR495C TY1B-LR1Q12088 1755 aaKnown RBP1.96□□□□□ -2.09
VPS3YDR495C TY1B-NL1Q12112 1755 aa1.96□□□□□ -2.09
VPS3YDR495C TY1B-GR1Q12141 1755 aa1.96□□□□□ -2.09
VPS3YDR495C TY1B-BLQ12490 1755 aa1.96□□□□□ -2.09
VPS3YDR495C YIL014C-AQ02598 104 aa1.96□□□□□ -2.1
VPS3YDR495C SRB6P32570 121 aa1.96□□□□□ -2.1
VPS3YDR495C FMT1P32785 401 aa1.96□□□□□ -2.1
VPS3YDR495C RPB7P34087 171 aa1.96□□□□□ -2.1
VPS3YDR495C YDR042CQ03205 200 aa1.96□□□□□ -2.1
VPS3YDR495C FLO9P39712 1322 aa1.95□□□□□ -2.1
VPS3YDR495C QCR8P08525 94 aa1.95□□□□□ -2.1
VPS3YDR495C YBR027CP38220 110 aa1.95□□□□□ -2.1
VPS3YDR495C PCC1Q3E833 88 aa1.95□□□□□ -2.1
VPS3YDR495C MLP2P40457 1679 aa1.95□□□□□ -2.1
VPS3YDR495C PAU19P0CE85 124 aa1.95□□□□□ -2.1
VPS3YDR495C PAU3P25610 124 aa1.95□□□□□ -2.1
VPS3YDR495C SNN1P48232 102 aa1.95□□□□□ -2.1
VPS3YDR495C RGM1Q00453 211 aa1.95□□□□□ -2.1
VPS3YDR495C MIX17Q03667 156 aa1.95□□□□□ -2.1
VPS3YDR495C YLR194CQ05777 254 aa1.95□□□□□ -2.1
VPS3YDR495C YLR419WQ06698 1435 aaKnown RBP1.95□□□□□ -2.1
VPS3YDR495C RPL36BO14455 100 aaKnown RBP1.94□□□□□ -2.1
VPS3YDR495C RPL36AP05745 100 aaPredicted RBP1.94□□□□□ -2.1
VPS3YDR495C COX23P38824 151 aa1.94□□□□□ -2.1
VPS3YDR495C YHR138CP38841 114 aaPredicted RBP1.94□□□□□ -2.1
VPS3YDR495C DSE2P38844 325 aa1.94□□□□□ -2.1
VPS3YDR495C SNQ2P32568 1501 aaKnown RBP1.94□□□□□ -2.1
VPS3YDR495C YHR213WP0CI67 198 aa1.94□□□□□ -2.1
VPS3YDR495C MYO1P08964 1928 aa1.94□□□□□ -2.1
VPS3YDR495C YHL005CP38752 130 aa1.93□□□□□ -2.1
VPS3YDR495C NUP159P40477 1460 aa1.93□□□□□ -2.1
VPS3YDR495C YMR175W-AQ3E766 64 aa1.93□□□□□ -2.1
VPS3YDR495C SRX1P36077 127 aa1.93□□□□□ -2.1
VPS3YDR495C ATG8P38182 117 aaRIP-Chip data1.93□□□□□ -2.1not detected
VPS3YDR495C PAU16P35994 123 aa1.93□□□□□ -2.1
VPS3YDR495C NRG2P38082 220 aa1.93□□□□□ -2.1
VPS3YDR495C PAU15P40585 124 aa1.93□□□□□ -2.1
VPS3YDR495C TY1B-DR3Q99231 1755 aa1.93□□□□□ -2.1
VPS3YDR495C CYB5P40312 120 aa1.92□□□□□ -2.1
VPS3YDR495C PDR5P33302 1511 aaKnown RBP1.92□□□□□ -2.1
VPS3YDR495C POR2P40478 281 aa1.91□□□□□ -2.1
VPS3YDR495C SEC7P11075 2009 aaKnown RBP1.91□□□□□ -2.1
VPS3YDR495C LST8P41318 303 aa1.91□□□□□ -2.1
VPS3YDR495C MHF1Q3E835 90 aa1.91□□□□□ -2.1
VPS3YDR495C TAR1Q8TGM6 124 aa1.91□□□□□ -2.1
VPS3YDR495C DAN1P47178 298 aa1.91□□□□□ -2.1
VPS3YDR495C YGL014C-AP0C5N1 53 aa1.9□□□□□ -2.11
VPS3YDR495C YEL008WP40001 126 aa1.9□□□□□ -2.11
VPS3YDR495C SED1Q01589 338 aa1.9□□□□□ -2.11
VPS3YDR495C YLR363W-AQ3E747 85 aa1.9□□□□□ -2.11
VPS3YDR495C YPR096CO13587 100 aa1.9□□□□□ -2.11
VPS3YDR495C CWP2P43497 92 aa1.9□□□□□ -2.11
VPS3YDR495C HPA2Q06592 156 aa1.9□□□□□ -2.11
VPS3YDR495C POC4Q12245 148 aaPredicted RBP1.9□□□□□ -2.11
VPS3YDR495C PFY1P07274 126 aa1.89□□□□□ -2.11
VPS3YDR495C SUS1Q6WNK7 96 aa1.89□□□□□ -2.11
VPS3YDR495C CDC39P25655 2108 aaKnown RBP1.89□□□□□ -2.11
VPS3YDR495C SRB8P25648 1427 aa1.89□□□□□ -2.11
VPS3YDR495C YCR085WP25650 117 aa1.89□□□□□ -2.11
VPS3YDR495C RPA12P32529 125 aaKnown RBP1.89□□□□□ -2.11
VPS3YDR495C ICY1Q04329 127 aa1.88□□□□□ -2.11
VPS3YDR495C RSM18P40033 138 aa1.88□□□□□ -2.11
VPS3YDR495C PAU5P43575 122 aa1.88□□□□□ -2.11
VPS3YDR495C PRM7Q12459 698 aa1.88□□□□□ -2.11
VPS3YDR495C ENV10Q99382 181 aa1.88□□□□□ -2.11
VPS3YDR495C LAA1P39526 2014 aa1.88□□□□□ -2.11
VPS3YDR495C AIM4P38305 123 aaPredicted RBP1.87□□□□□ -2.11
VPS3YDR495C YHL037CP38733 133 aa1.87□□□□□ -2.11
VPS3YDR495C GCV3P39726 170 aaPredicted RBP1.87□□□□□ -2.11
VPS3YDR495C IMP2P46972 177 aa1.87□□□□□ -2.11
VPS3YDR495C YMR122CQ03879 124 aa1.87□□□□□ -2.11
VPS3YDR495C VAM10Q08474 114 aa1.87□□□□□ -2.11
VPS3YDR495C YHR086W-AQ3E746 53 aa1.87□□□□□ -2.11
VPS3YDR495C RPL33AP05744 107 aaKnown RBP1.87□□□□□ -2.11
VPS3YDR495C YCL042WP25572 119 aa1.87□□□□□ -2.11
VPS3YDR495C YBR219CP38317 127 aa1.87□□□□□ -2.11
VPS3YDR495C ROX3P25046 220 aa1.86□□□□□ -2.11
VPS3YDR495C YFL065CP43539 102 aa1.86□□□□□ -2.11
VPS3YDR495C PRM3Q08931 133 aa1.86□□□□□ -2.11
VPS3YDR495C YPR203WQ08994 102 aa1.86□□□□□ -2.11
VPS3YDR495C YHR213W-AQ8TGT4 77 aa1.86□□□□□ -2.11
VPS3YDR495C VTH1P40438 1549 aa1.86□□□□□ -2.11
VPS3YDR495C VTH2P40890 1549 aa1.86□□□□□ -2.11
VPS3YDR495C YDL012CQ12489 107 aa1.85□□□□□ -2.11
VPS3YDR495C YLR285C-AQ3E771 56 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 88.8 ms