RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W YLR042CQ07990 161 aa-0.19□□□□□ -2.44
PRP42YDR235W YLR363W-AQ3E747 85 aa-0.19□□□□□ -2.44
PRP42YDR235W YLR361C-AQ3E795 98 aa-0.19□□□□□ -2.44
PRP42YDR235W YPL038W-AQ3E7B4 63 aa-0.19□□□□□ -2.44
PRP42YDR235W YNL277W-AQ3E7Z0 62 aa-0.19□□□□□ -2.44
PRP42YDR235W YCR108CQ3E819 63 aa-0.19□□□□□ -2.44
PRP42YDR235W YNR034W-AQ3E841 98 aa-0.19□□□□□ -2.44
PRP42YDR235W YPK9Q12697 1472 aa-0.19□□□□□ -2.44
PRP42YDR235W YCR101CP25607 182 aa-0.2□□□□□ -2.44
PRP42YDR235W MRPL38P35996 138 aaPredicted RBP-0.2□□□□□ -2.44
PRP42YDR235W YBL071CP38185 102 aa-0.2□□□□□ -2.44
PRP42YDR235W MPC2P38857 129 aa-0.2□□□□□ -2.44
PRP42YDR235W PAU5P43575 122 aa-0.2□□□□□ -2.44
PRP42YDR235W YGR164WP53291 111 aa-0.2□□□□□ -2.44
PRP42YDR235W AIM11P87275 137 aa-0.2□□□□□ -2.44
PRP42YDR235W FRQ1Q06389 190 aa-0.2□□□□□ -2.44
PRP42YDR235W DAD1Q12248 94 aa-0.2□□□□□ -2.44
PRP42YDR235W YLR118CQ12354 227 aa-0.2□□□□□ -2.44
PRP42YDR235W Q0144Q9ZZW2 109 aa-0.2□□□□□ -2.44
PRP42YDR235W KRE5P22023 1365 aa-0.2□□□□□ -2.44
PRP42YDR235W MYO2P19524 1574 aaKnown RBP-0.2□□□□□ -2.44
PRP42YDR235W PMD1P32634 1753 aa-0.2□□□□□ -2.44
PRP42YDR235W TY1B-BRQ12193 1756 aa-0.2□□□□□ -2.44
PRP42YDR235W SSN2P38931 1420 aa-0.2□□□□□ -2.44
PRP42YDR235W YCR099CP25657 155 aa-0.2□□□□□ -2.44
PRP42YDR235W RPB11P38902 120 aa-0.2□□□□□ -2.44
PRP42YDR235W YOL118CQ08259 102 aa-0.2□□□□□ -2.44
PRP42YDR235W SLO1Q3E784 85 aa-0.2□□□□□ -2.44
PRP42YDR235W YCR095W-AQ3E787 52 aa-0.2□□□□□ -2.44
PRP42YDR235W BUD4P47136 1447 aa-0.21□□□□□ -2.44
PRP42YDR235W RSF2P46974 1380 aa-0.21□□□□□ -2.44
PRP42YDR235W PAU8P0CE92 120 aa-0.21□□□□□ -2.44
PRP42YDR235W PAU11P0CE93 120 aa-0.21□□□□□ -2.44
PRP42YDR235W MRP17P28778 131 aa-0.21□□□□□ -2.44
PRP42YDR235W POP7P38291 140 aa-0.21□□□□□ -2.44
PRP42YDR235W PAU13P38725 120 aa-0.21□□□□□ -2.44
PRP42YDR235W YHR138CP38841 114 aaPredicted RBP-0.21□□□□□ -2.44
PRP42YDR235W RSM18P40033 138 aa-0.21□□□□□ -2.44
PRP42YDR235W SPC1P46965 94 aa-0.21□□□□□ -2.44
PRP42YDR235W PAU4P53427 120 aa-0.21□□□□□ -2.44
PRP42YDR235W DYN2Q02647 92 aa-0.21□□□□□ -2.44
PRP42YDR235W PAU10Q03050 120 aa-0.21□□□□□ -2.44
PRP42YDR235W PAU9Q3E770 120 aa-0.21□□□□□ -2.44
PRP42YDR235W YLR365WQ7LIF2 110 aa-0.21□□□□□ -2.44
PRP42YDR235W Q0032Q9ZZX7 96 aa-0.21□□□□□ -2.44
PRP42YDR235W TY1B-PR2P0C2J0 1756 aa-0.21□□□□□ -2.44
PRP42YDR235W YLR419WQ06698 1435 aaKnown RBP-0.22□□□□□ -2.44
PRP42YDR235W LHP1P33399 275 aaKnown RBP-0.22□□□□□ -2.44
PRP42YDR235W RSM19P53733 91 aaPredicted RBP-0.22□□□□□ -2.44
PRP42YDR235W SNA2P56508 79 aa-0.22□□□□□ -2.44
PRP42YDR235W NHP10Q03435 203 aa-0.22□□□□□ -2.44
PRP42YDR235W ICY1Q04329 127 aa-0.22□□□□□ -2.44
PRP42YDR235W PAU20Q08322 120 aa-0.22□□□□□ -2.44
PRP42YDR235W RTR2Q12378 196 aa-0.22□□□□□ -2.44
PRP42YDR235W WIP1Q2V2P8 89 aa-0.22□□□□□ -2.44
PRP42YDR235W NTE1Q04958 1679 aa-0.22□□□□□ -2.44
PRP42YDR235W DNF3Q12674 1656 aa-0.22□□□□□ -2.44
PRP42YDR235W UTP20P35194 2493 aaKnown RBP-0.22□□□□□ -2.45
PRP42YDR235W SEN1Q00416 2231 aaKnown RBP-0.22□□□□□ -2.45
PRP42YDR235W TY1B-DR5P0C2I2 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-DR6P0C2I3 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-LR2P0C2I5 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.23□□□□□ -2.45
PRP42YDR235W TY1B-JR2P47100 1755 aaKnown RBP-0.23□□□□□ -2.45
PRP42YDR235W TY1B-ER2Q03619 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-DR1Q03855 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-MR1Q04214 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-MR2Q04670 1755 aaKnown RBP-0.23□□□□□ -2.45
PRP42YDR235W TY1B-ML1Q04711 1755 aaKnown RBP-0.23□□□□□ -2.45
PRP42YDR235W TY1B-LR1Q12088 1755 aaKnown RBP-0.23□□□□□ -2.45
PRP42YDR235W TY1B-NL1Q12112 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-GR1Q12141 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-GR2Q12269 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-GR3Q12316 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-PLQ12414 1755 aaKnown RBP-0.23□□□□□ -2.45
PRP42YDR235W TY1B-ORQ92393 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W LYS2P07702 1392 aa-0.23□□□□□ -2.45
PRP42YDR235W ATX1P38636 73 aa-0.23□□□□□ -2.45
PRP42YDR235W GTT1P40582 234 aa-0.23□□□□□ -2.45
PRP42YDR235W NKP2Q06162 153 aa-0.23□□□□□ -2.45
PRP42YDR235W YCL048W-AQ2V2Q2 79 aa-0.23□□□□□ -2.45
PRP42YDR235W YDR381C-AQ3E6R5 114 aa-0.23□□□□□ -2.45
PRP42YDR235W RRT15Q3E811 62 aa-0.23□□□□□ -2.45
PRP42YDR235W MIC10Q96VH5 97 aa-0.23□□□□□ -2.45
PRP42YDR235W TY1B-DR3Q99231 1755 aa-0.23□□□□□ -2.45
PRP42YDR235W SRB8P25648 1427 aa-0.23□□□□□ -2.45
PRP42YDR235W YER039C-AP0CD97 72 aa-0.24□□□□□ -2.45
PRP42YDR235W PAU1P0CE88 120 aa-0.24□□□□□ -2.45
PRP42YDR235W PAU14P0CE89 120 aa-0.24□□□□□ -2.45
PRP42YDR235W YGL204CP53089 101 aa-0.24□□□□□ -2.45
PRP42YDR235W MPC1P53157 130 aaKnown RBP-0.24□□□□□ -2.45
PRP42YDR235W APS2Q00381 147 aa-0.24□□□□□ -2.45
PRP42YDR235W YDR278CQ05612 105 aa-0.24□□□□□ -2.45
PRP42YDR235W YBR201C-AQ2V2Q3 67 aa-0.24□□□□□ -2.45
PRP42YDR235W COX19Q3E731 98 aa-0.24□□□□□ -2.45
PRP42YDR235W BPH1P25356 2167 aa-0.24□□□□□ -2.45
PRP42YDR235W ECM29P38737 1868 aa-0.24□□□□□ -2.45
PRP42YDR235W SRB6P32570 121 aa-0.24□□□□□ -2.45
PRP42YDR235W VMA7P39111 118 aa-0.24□□□□□ -2.45
PRP42YDR235W HUR1P45820 110 aa-0.24□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms