RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C TY1B-DR1Q03855 1755 aa2.87□□□□□ -1.95
SPR28YDR218C TY1B-DR3Q99231 1755 aa2.87□□□□□ -1.95
SPR28YDR218C LSM2P38203 95 aaKnown RBP2.86□□□□□ -1.95
SPR28YDR218C PAU5P43575 122 aa2.86□□□□□ -1.95
SPR28YDR218C ICS3P47034 131 aa2.86□□□□□ -1.95
SPR28YDR218C LSM6Q06406 86 aaKnown RBP2.86□□□□□ -1.95
SPR28YDR218C SMC4Q12267 1418 aa2.85□□□□□ -1.95
SPR28YDR218C HMRA2P0CY13 119 aa2.85□□□□□ -1.95
SPR28YDR218C MRP17P28778 131 aa2.85□□□□□ -1.95
SPR28YDR218C YBR219CP38317 127 aa2.85□□□□□ -1.95
SPR28YDR218C IRC21Q04772 201 aa2.85□□□□□ -1.95
SPR28YDR218C MMS22Q06164 1454 aa2.84□□□□□ -1.95
SPR28YDR218C SIN3P22579 1536 aa2.84□□□□□ -1.95
SPR28YDR218C PAI3P01094 68 aa2.84□□□□□ -1.95
SPR28YDR218C YNL146C-AQ3E7Z1 64 aa2.84□□□□□ -1.95
SPR28YDR218C SWM2P40342 146 aa2.83□□□□□ -1.96
SPR28YDR218C YIL163CP40448 117 aa2.83□□□□□ -1.96
SPR28YDR218C COA4Q05809 96 aa2.83□□□□□ -1.96
SPR28YDR218C PRM3Q08931 133 aa2.83□□□□□ -1.96
SPR28YDR218C YLR285C-AQ3E771 56 aa2.83□□□□□ -1.96
SPR28YDR218C YCR095W-AQ3E787 52 aa2.83□□□□□ -1.96
SPR28YDR218C RPS22AP0C0W1 130 aaKnown RBP2.82□□□□□ -1.96
SPR28YDR218C YEL008WP40001 126 aa2.82□□□□□ -1.96
SPR28YDR218C VPS55P47111 140 aa2.82□□□□□ -1.96
SPR28YDR218C YGL041C-BQ3E750 60 aa2.82□□□□□ -1.96
SPR28YDR218C FAB1P34756 2278 aa2.82□□□□□ -1.96
SPR28YDR218C POL1P13382 1468 aa2.82□□□□□ -1.96
SPR28YDR218C CCW14O13547 238 aa2.81□□□□□ -1.96
SPR28YDR218C YSF3P0C074 85 aaPredicted RBP2.81□□□□□ -1.96
SPR28YDR218C SNA2P56508 79 aa2.81□□□□□ -1.96
SPR28YDR218C YLR162WQ06235 118 aa2.81□□□□□ -1.96
SPR28YDR218C YOR343CQ12484 108 aa2.81□□□□□ -1.96
SPR28YDR218C MYO1P08964 1928 aa2.81□□□□□ -1.96
SPR28YDR218C YCL042WP25572 119 aa2.8□□□□□ -1.96
SPR28YDR218C COA3Q3E7B2 85 aa2.8□□□□□ -1.96
SPR28YDR218C YJL009WP47078 108 aa2.79□□□□□ -1.96
SPR28YDR218C YHR086W-AQ3E746 53 aa2.79□□□□□ -1.96
SPR28YDR218C DOP1Q03921 1698 aa2.79□□□□□ -1.96
SPR28YDR218C FAS2P19097 1887 aaKnown RBP2.78□□□□□ -1.96
SPR28YDR218C AIM4P38305 123 aaPredicted RBP2.78□□□□□ -1.96
SPR28YDR218C YDR119W-AQ2V2P9 66 aa2.78□□□□□ -1.96
SPR28YDR218C YDR381C-AQ3E6R5 114 aa2.78□□□□□ -1.96
SPR28YDR218C TCB3Q03640 1545 aaKnown RBP2.78□□□□□ -1.97
SPR28YDR218C NTE1Q04958 1679 aa2.77□□□□□ -1.97
SPR28YDR218C YBR013CP38215 129 aa2.77□□□□□ -1.97
SPR28YDR218C MIC27P50945 234 aa2.77□□□□□ -1.97
SPR28YDR218C XRN1P22147 1528 aaKnown RBP2.77□□□□□ -1.97
SPR28YDR218C SCC2Q04002 1493 aa2.77□□□□□ -1.97
SPR28YDR218C SEC7P11075 2009 aaKnown RBP2.76□□□□□ -1.97
SPR28YDR218C YHR214C-DP0CX93 97 aa2.76□□□□□ -1.97
SPR28YDR218C NHP2P32495 156 aaPredicted RBP2.76□□□□□ -1.97
SPR28YDR218C MRPL38P35996 138 aaPredicted RBP2.76□□□□□ -1.97
SPR28YDR218C SRB8P25648 1427 aa2.76□□□□□ -1.97
SPR28YDR218C MLP1Q02455 1875 aaKnown RBP2.75□□□□□ -1.97
SPR28YDR218C MRX7P53869 86 aa2.75□□□□□ -1.97
SPR28YDR218C COX12Q01519 83 aa2.75□□□□□ -1.97
SPR28YDR218C RPS22BQ3E7Y3 130 aaKnown RBP2.75□□□□□ -1.97
SPR28YDR218C CCW12Q12127 133 aa2.74□□□□□ -1.97
SPR28YDR218C YDL012CQ12489 107 aa2.74□□□□□ -1.97
SPR28YDR218C YKL065W-AQ2V2P2 73 aa2.74□□□□□ -1.97
SPR28YDR218C YGR240C-AQ3E786 66 aa2.74□□□□□ -1.97
SPR28YDR218C AIM19P40502 157 aa2.73□□□□□ -1.97
SPR28YDR218C ATX1P38636 73 aa2.72□□□□□ -1.97
SPR28YDR218C SPC1P46965 94 aa2.72□□□□□ -1.97
SPR28YDR218C YOR314WQ12506 109 aa2.72□□□□□ -1.97
SPR28YDR218C YPL038W-AQ3E7B4 63 aa2.72□□□□□ -1.97
SPR28YDR218C YFR010W-AP0C5N0 62 aa2.71□□□□□ -1.98
SPR28YDR218C YBL071CP38185 102 aa2.71□□□□□ -1.98
SPR28YDR218C PAU23Q07987 124 aa2.71□□□□□ -1.98
SPR28YDR218C PAU17Q12370 124 aa2.71□□□□□ -1.98
SPR28YDR218C TY1B-DR4Q07793 1604 aa2.71□□□□□ -1.98
SPR28YDR218C YBR292CP38357 123 aa2.7□□□□□ -1.98
SPR28YDR218C YNL122CP53921 115 aaPredicted RBP2.7□□□□□ -1.98
SPR28YDR218C YDR210WQ03482 75 aa2.7□□□□□ -1.98
SPR28YDR218C LCL2Q08045 131 aa2.7□□□□□ -1.98
SPR28YDR218C BSC4P53841 131 aa2.69□□□□□ -1.98
SPR28YDR218C YOR072WQ08486 104 aa2.69□□□□□ -1.98
SPR28YDR218C YPR145C-AQ2V2P0 78 aa2.69□□□□□ -1.98
SPR28YDR218C YFL041W-AQ3E817 63 aa2.69□□□□□ -1.98
SPR28YDR218C CDC39P25655 2108 aaKnown RBP2.69□□□□□ -1.98
SPR28YDR218C TY1B-GR3Q12316 1755 aa2.69□□□□□ -1.98
SPR28YDR218C TY1B-ORQ92393 1755 aa2.69□□□□□ -1.98
SPR28YDR218C PAU6P0CE90 120 aa2.68□□□□□ -1.98
SPR28YDR218C PAU18P0CE91 120 aa2.68□□□□□ -1.98
SPR28YDR218C UFD4P33202 1483 aa2.67□□□□□ -1.98
SPR28YDR218C YAL065CO13511 128 aa2.67□□□□□ -1.98
SPR28YDR218C MRPL31P14063 131 aaPredicted RBP2.67□□□□□ -1.98
SPR28YDR218C SSS1P35179 80 aa2.67□□□□□ -1.98
SPR28YDR218C MPC2P38857 129 aa2.67□□□□□ -1.98
SPR28YDR218C MRPS12P53732 153 aa2.67□□□□□ -1.98
SPR28YDR218C YER188C-AP0C0V2 99 aa2.66□□□□□ -1.98
SPR28YDR218C YOR105WQ08504 108 aa2.66□□□□□ -1.98
SPR28YDR218C ECM29P38737 1868 aa2.66□□□□□ -1.98
SPR28YDR218C UBR2Q07963 1872 aa2.66□□□□□ -1.98
SPR28YDR218C TY1B-DR5P0C2I2 1755 aa2.66□□□□□ -1.98
SPR28YDR218C TY1B-DR6P0C2I3 1755 aa2.66□□□□□ -1.98
SPR28YDR218C TY1B-LR2P0C2I5 1755 aa2.66□□□□□ -1.98
SPR28YDR218C TY1B-LR3P0C2I6 1755 aaKnown RBP2.66□□□□□ -1.98
SPR28YDR218C TY1B-PR1P0C2I9 1755 aaKnown RBP2.66□□□□□ -1.98
SPR28YDR218C TY1B-PR3P0C2J1 1755 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms