RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YPR170W-BP0C5R9 85 aa1.62□□□□□ -2.15
BRE1YDL074C PRE1P22141 198 aaKnown RBP1.62□□□□□ -2.15
BRE1YDL074C RPL16BP26785 198 aaKnown RBP1.62□□□□□ -2.15
BRE1YDL074C YPT53P36019 220 aa1.62□□□□□ -2.15
BRE1YDL074C AIM29P36154 155 aa1.62□□□□□ -2.15
BRE1YDL074C PET8P38921 284 aa1.62□□□□□ -2.15
BRE1YDL074C WWM1P43582 211 aaKnown RBP1.62□□□□□ -2.15
BRE1YDL074C CAX4P53223 239 aa1.62□□□□□ -2.15
BRE1YDL074C YLR194CQ05777 254 aa1.62□□□□□ -2.15
BRE1YDL074C MSA1Q08471 629 aa1.62□□□□□ -2.15
BRE1YDL074C DGA1Q08650 418 aa1.62□□□□□ -2.15
BRE1YDL074C COA3Q3E7B2 85 aa1.62□□□□□ -2.15
BRE1YDL074C MEC1P38111 2368 aa1.62□□□□□ -2.15
BRE1YDL074C YPR010C-AA5Z2X5 72 aa1.61□□□□□ -2.15
BRE1YDL074C MBF1O14467 151 aaKnown RBP1.61□□□□□ -2.15
BRE1YDL074C HYP2P23301 157 aaKnown RBP1.61□□□□□ -2.15
BRE1YDL074C YCL042WP25572 119 aa1.61□□□□□ -2.15
BRE1YDL074C DUT1P33317 147 aa1.61□□□□□ -2.15
BRE1YDL074C MIG3P39943 394 aa1.61□□□□□ -2.15
BRE1YDL074C MOT3P54785 490 aaKnown RBP1.61□□□□□ -2.15
BRE1YDL074C YLR042CQ07990 161 aa1.61□□□□□ -2.15
BRE1YDL074C YPL257WQ08974 193 aa1.61□□□□□ -2.15
BRE1YDL074C YGR240C-AQ3E786 66 aa1.61□□□□□ -2.15
BRE1YDL074C TOR1P35169 2470 aa1.61□□□□□ -2.15
BRE1YDL074C RPS8AP0CX39 200 aaKnown RBP1.61□□□□□ -2.15
BRE1YDL074C RPS8BP0CX40 200 aaKnown RBP1.61□□□□□ -2.15
BRE1YDL074C NHP2P32495 156 aaPredicted RBP1.61□□□□□ -2.15
BRE1YDL074C YKR041WP36134 250 aa1.61□□□□□ -2.15
BRE1YDL074C YCR041WP37265 110 aa1.61□□□□□ -2.15
BRE1YDL074C SIM1P40472 476 aa1.61□□□□□ -2.15
BRE1YDL074C YJR146WP47174 117 aa1.61□□□□□ -2.15
BRE1YDL074C AIM11P87275 137 aa1.61□□□□□ -2.15
BRE1YDL074C YDR274CP87283 123 aa1.61□□□□□ -2.15
BRE1YDL074C SCW10Q04951 389 aa1.61□□□□□ -2.15
BRE1YDL074C YPR013CQ12145 317 aa1.61□□□□□ -2.15
BRE1YDL074C YOR097CQ12274 175 aaPredicted RBP1.61□□□□□ -2.15
BRE1YDL074C YCL021W-AQ96VH3 125 aa1.61□□□□□ -2.15
BRE1YDL074C YHR212W-AP0CX91 67 aa1.6□□□□□ -2.15
BRE1YDL074C SHU1P38751 150 aa1.6□□□□□ -2.15
BRE1YDL074C YHR130CP38834 111 aa1.6□□□□□ -2.15
BRE1YDL074C RRT13P40042 185 aa1.6□□□□□ -2.15
BRE1YDL074C AGE2P40529 298 aa1.6□□□□□ -2.15
BRE1YDL074C TMA7Q3E764 64 aaKnown RBP1.6□□□□□ -2.15
BRE1YDL074C TEL1P38110 2787 aa1.6□□□□□ -2.15
BRE1YDL074C YBR056W-AI2HB52 66 aa1.6□□□□□ -2.15
BRE1YDL074C RPL16AP26784 199 aaKnown RBP1.6□□□□□ -2.15
BRE1YDL074C MIG1P27705 504 aa1.6□□□□□ -2.15
BRE1YDL074C YBR209WP38311 105 aa1.6□□□□□ -2.15
BRE1YDL074C OXA1P39952 402 aa1.6□□□□□ -2.15
BRE1YDL074C VHS2P40463 436 aa1.6□□□□□ -2.15
BRE1YDL074C YPS5P53057 165 aa1.6□□□□□ -2.15
BRE1YDL074C LSM6Q06406 86 aaKnown RBP1.6□□□□□ -2.15
BRE1YDL074C YOL085CQ99345 113 aa1.6□□□□□ -2.15
BRE1YDL074C ENV10Q99382 181 aa1.6□□□□□ -2.15
BRE1YDL074C ADH1P00330 348 aaKnown RBP1.59□□□□□ -2.15
BRE1YDL074C RPL18AP0CX49 186 aaKnown RBP1.59□□□□□ -2.15
BRE1YDL074C RPL18BP0CX50 186 aaKnown RBP1.59□□□□□ -2.15
BRE1YDL074C UBC5P15732 148 aa1.59□□□□□ -2.15
BRE1YDL074C ATP15P21306 62 aa1.59□□□□□ -2.15
BRE1YDL074C ARO2P28777 376 aaKnown RBP1.59□□□□□ -2.15
BRE1YDL074C MLF3P32047 452 aa1.59□□□□□ -2.15
BRE1YDL074C NRG2P38082 220 aa1.59□□□□□ -2.15
BRE1YDL074C ERG28P40030 148 aa1.59□□□□□ -2.15
BRE1YDL074C ARC15P40518 154 aaRIP-Chip data1.59□□□□□ -2.15not detected
BRE1YDL074C YIL059CP40520 121 aa1.59□□□□□ -2.15
BRE1YDL074C COX12Q01519 83 aa1.59□□□□□ -2.15
BRE1YDL074C SGF11Q03067 99 aa1.59□□□□□ -2.15
BRE1YDL074C YOR020W-AQ3E824 90 aa1.59□□□□□ -2.15
BRE1YDL074C YMR122W-AQ3E842 84 aa1.59□□□□□ -2.15
BRE1YDL074C CUP1-1P0CX80 61 aa1.58□□□□□ -2.16
BRE1YDL074C CUP1-2P0CX81 61 aa1.58□□□□□ -2.16
BRE1YDL074C UGX2P32772 223 aa1.58□□□□□ -2.16
BRE1YDL074C YEL008WP40001 126 aa1.58□□□□□ -2.16
BRE1YDL074C CIN5P40917 295 aa1.58□□□□□ -2.16
BRE1YDL074C FIP1P45976 327 aa1.58□□□□□ -2.16
BRE1YDL074C SPC1P46965 94 aa1.58□□□□□ -2.16
BRE1YDL074C YGR025WP53216 100 aa1.58□□□□□ -2.16
BRE1YDL074C HPA2Q06592 156 aa1.58□□□□□ -2.16
BRE1YDL074C VAM10Q08474 114 aa1.58□□□□□ -2.16
BRE1YDL074C TAR1Q8TGM6 124 aa1.58□□□□□ -2.16
BRE1YDL074C YCR085WP25650 117 aa1.58□□□□□ -2.16
BRE1YDL074C KRE9P39005 276 aa1.58□□□□□ -2.16
BRE1YDL074C YER085CP40058 173 aa1.58□□□□□ -2.16
BRE1YDL074C YNL198CP40166 100 aa1.58□□□□□ -2.16
BRE1YDL074C EOS1P53938 366 aa1.58□□□□□ -2.16
BRE1YDL074C YDL241WQ07738 123 aa1.58□□□□□ -2.16
BRE1YDL074C CRC1Q12289 327 aa1.58□□□□□ -2.16
BRE1YDL074C YMR175W-AQ3E766 64 aa1.58□□□□□ -2.16
BRE1YDL074C SLO1Q3E784 85 aa1.58□□□□□ -2.16
BRE1YDL074C RPL28P02406 149 aaKnown RBP1.57□□□□□ -2.16
BRE1YDL074C COX10P21592 462 aa1.57□□□□□ -2.16
BRE1YDL074C TOA2P32774 122 aa1.57□□□□□ -2.16
BRE1YDL074C ATX1P38636 73 aa1.57□□□□□ -2.16
BRE1YDL074C YIA6P40556 373 aa1.57□□□□□ -2.16
BRE1YDL074C RUB1Q03919 77 aa1.57□□□□□ -2.16
BRE1YDL074C YLR281CQ05863 155 aa1.57□□□□□ -2.16
BRE1YDL074C COX14P39103 70 aa1.57□□□□□ -2.16
BRE1YDL074C RPR2P40571 144 aa1.57□□□□□ -2.16
BRE1YDL074C CWP2P43497 92 aa1.57□□□□□ -2.16
BRE1YDL074C YNR077CP53758 84 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms