RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W MRPL24P36525 258 aaPredicted RBP5.21□□□□□ -1.57
BDF2YDL070W MIC12P38341 106 aa5.21□□□□□ -1.57
BDF2YDL070W IRC23Q08416 157 aa5.21□□□□□ -1.57
BDF2YDL070W YOR008C-AQ3E7B9 74 aa5.21□□□□□ -1.57
BDF2YDL070W YBR056W-AI2HB52 66 aa5.21□□□□□ -1.58
BDF2YDL070W GAT3Q07928 141 aa5.21□□□□□ -1.58
BDF2YDL070W MRPL23Q12487 163 aaPredicted RBP5.21□□□□□ -1.58
BDF2YDL070W TRA1P38811 3744 aa5.21□□□□□ -1.58
BDF2YDL070W Q0255P03881 472 aa5.2□□□□□ -1.58
BDF2YDL070W RAD6P06104 172 aa5.2□□□□□ -1.58
BDF2YDL070W RPL43AP0CX25 92 aaKnown RBP5.2□□□□□ -1.58
BDF2YDL070W RPL43BP0CX26 92 aa5.2□□□□□ -1.58
BDF2YDL070W ATP15P21306 62 aa5.2□□□□□ -1.58
BDF2YDL070W VMA11P32842 164 aa5.2□□□□□ -1.58
BDF2YDL070W COX12Q01519 83 aa5.2□□□□□ -1.58
BDF2YDL070W UTP20P35194 2493 aaKnown RBP5.19□□□□□ -1.58
BDF2YDL070W YHR139C-AO13536 103 aa5.19□□□□□ -1.58
BDF2YDL070W COF1Q03048 143 aaKnown RBP5.19□□□□□ -1.58
BDF2YDL070W YLR415CO13578 112 aa5.19□□□□□ -1.58
BDF2YDL070W YIL059CP40520 121 aa5.19□□□□□ -1.58
BDF2YDL070W KNH1P50112 268 aa5.19□□□□□ -1.58
BDF2YDL070W DUO1P53168 247 aaKnown RBP5.19□□□□□ -1.58
BDF2YDL070W YNL234WP53857 426 aa5.19□□□□□ -1.58
BDF2YDL070W YOL160WQ08321 113 aa5.19□□□□□ -1.58
BDF2YDL070W YCL021W-AQ96VH3 125 aa5.19□□□□□ -1.58
BDF2YDL070W RPL28P02406 149 aaKnown RBP5.18□□□□□ -1.58
BDF2YDL070W RPS23AP0CX29 145 aaKnown RBP5.18□□□□□ -1.58
BDF2YDL070W RPS23BP0CX30 145 aa5.18□□□□□ -1.58
BDF2YDL070W ADH5P38113 351 aaKnown RBP5.18□□□□□ -1.58
BDF2YDL070W URM1P40554 99 aaPredicted RBP5.18□□□□□ -1.58
BDF2YDL070W YNL190WP53872 204 aa5.18□□□□□ -1.58
BDF2YDL070W CTR2P38865 189 aa5.17□□□□□ -1.58
BDF2YDL070W LCB3P47013 409 aa5.17□□□□□ -1.58
BDF2YDL070W PBI2P0CT04 75 aaKnown RBP5.17□□□□□ -1.58
BDF2YDL070W INO2P26798 304 aa5.16□□□□□ -1.58
BDF2YDL070W MRPL38P35996 138 aaPredicted RBP5.16□□□□□ -1.58
BDF2YDL070W YHL042WP38729 150 aa5.16□□□□□ -1.58
BDF2YDL070W YGL260WP53056 76 aa5.16□□□□□ -1.58
BDF2YDL070W RPL42AP0CX27 106 aaKnown RBP5.15□□□□□ -1.58
BDF2YDL070W RPL42BP0CX28 106 aaKnown RBP5.15□□□□□ -1.58
BDF2YDL070W RPL18AP0CX49 186 aaKnown RBP5.15□□□□□ -1.58
BDF2YDL070W RPL18BP0CX50 186 aaKnown RBP5.15□□□□□ -1.58
BDF2YDL070W AIM19P40502 157 aa5.15□□□□□ -1.58
BDF2YDL070W MRPS12P53732 153 aa5.15□□□□□ -1.58
BDF2YDL070W SMP1P38128 452 aa5.15□□□□□ -1.59
BDF2YDL070W SGN1P40561 250 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
BDF2YDL070W CAX4P53223 239 aa5.15□□□□□ -1.59
BDF2YDL070W YDR029WQ12111 104 aa5.15□□□□□ -1.59
BDF2YDL070W YDL009CQ12210 107 aa5.15□□□□□ -1.59
BDF2YDL070W CCW14O13547 238 aa5.14□□□□□ -1.59
BDF2YDL070W YGR025WP53216 100 aa5.14□□□□□ -1.59
BDF2YDL070W NCE103P53615 221 aa5.14□□□□□ -1.59
BDF2YDL070W YDR381C-AQ3E6R5 114 aa5.14□□□□□ -1.59
BDF2YDL070W ECM12O13529 151 aa5.13□□□□□ -1.59
BDF2YDL070W RPB10P22139 70 aa5.13□□□□□ -1.59
BDF2YDL070W DCV1P43595 202 aa5.13□□□□□ -1.59
BDF2YDL070W PBA1Q05778 276 aa5.13□□□□□ -1.59
BDF2YDL070W PBP4Q07362 185 aaKnown RBP5.13□□□□□ -1.59
BDF2YDL070W YER039C-AP0CD97 72 aa5.13□□□□□ -1.59
BDF2YDL070W YER121WP40076 114 aa5.13□□□□□ -1.59
BDF2YDL070W STF1P01098 86 aa5.12□□□□□ -1.59
BDF2YDL070W RPL16AP26784 199 aaKnown RBP5.11□□□□□ -1.59
BDF2YDL070W PEX17P40155 199 aa5.11□□□□□ -1.59
BDF2YDL070W POR2P40478 281 aa5.11□□□□□ -1.59
BDF2YDL070W YGR045CP53229 120 aa5.11□□□□□ -1.59
BDF2YDL070W YPL038W-AQ3E7B4 63 aa5.11□□□□□ -1.59
BDF2YDL070W YOL085CQ99345 113 aa5.11□□□□□ -1.59
BDF2YDL070W TRP1P00912 224 aa5.11□□□□□ -1.59
BDF2YDL070W YJR146WP47174 117 aa5.11□□□□□ -1.59
BDF2YDL070W YGR219WP53307 113 aa5.11□□□□□ -1.59
BDF2YDL070W SED1Q01589 338 aa5.11□□□□□ -1.59
BDF2YDL070W BNA1P47096 177 aa5.1□□□□□ -1.59
BDF2YDL070W RPL15AP05748 204 aaKnown RBP5.09□□□□□ -1.59
BDF2YDL070W UBC5P15732 148 aa5.09□□□□□ -1.59
BDF2YDL070W TOM6P33448 61 aa5.09□□□□□ -1.59
BDF2YDL070W WWM1P43582 211 aaKnown RBP5.09□□□□□ -1.59
BDF2YDL070W KEG1P43614 200 aa5.09□□□□□ -1.59
BDF2YDL070W HUR1P45820 110 aa5.09□□□□□ -1.59
BDF2YDL070W SBH2P52871 88 aa5.09□□□□□ -1.59
BDF2YDL070W YBR200W-AQ3E755 54 aa5.09□□□□□ -1.59
BDF2YDL070W YNL046WP53956 172 aa5.08□□□□□ -1.6
BDF2YDL070W SHU1P38751 150 aa5.07□□□□□ -1.6
BDF2YDL070W EMC6Q12431 108 aa5.07□□□□□ -1.6
BDF2YDL070W RPL2AP0CX45 254 aaKnown RBP5.07□□□□□ -1.6
BDF2YDL070W RPL2BP0CX46 254 aaKnown RBP5.07□□□□□ -1.6
BDF2YDL070W MPC2P38857 129 aa5.07□□□□□ -1.6
BDF2YDL070W SHH4Q06236 168 aa5.07□□□□□ -1.6
BDF2YDL070W YHL018WP38744 120 aaPredicted RBP5.06□□□□□ -1.6
BDF2YDL070W YHR022CP38763 256 aa5.06□□□□□ -1.6
BDF2YDL070W YLR042CQ07990 161 aa5.06□□□□□ -1.6
BDF2YDL070W YCL048W-AQ2V2Q2 79 aa5.06□□□□□ -1.6
BDF2YDL070W IES6P32617 166 aa5.05□□□□□ -1.6
BDF2YDL070W MSA2P36157 363 aa5.05□□□□□ -1.6
BDF2YDL070W YBR209WP38311 105 aa5.05□□□□□ -1.6
BDF2YDL070W SIM1P40472 476 aa5.05□□□□□ -1.6
BDF2YDL070W YGL088WP53151 121 aa5.05□□□□□ -1.6
BDF2YDL070W QCR8P08525 94 aa5.05□□□□□ -1.6
BDF2YDL070W SVP26P38869 228 aa5.05□□□□□ -1.6
BDF2YDL070W YSY6P38374 65 aa5.04□□□□□ -1.6
BDF2YDL070W YHL037CP38733 133 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms