RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C RPF1P38805 295 aaKnown RBP1.71□□□□□ -2.13
CLN3YAL040C YER134CP40081 178 aa1.71□□□□□ -2.13
CLN3YAL040C YNL200CP40165 246 aaKnown RBP1.71□□□□□ -2.13
CLN3YAL040C PRE5P40302 234 aaKnown RBP1.71□□□□□ -2.13
CLN3YAL040C YFR035CP43608 114 aa1.71□□□□□ -2.13
CLN3YAL040C YJL028WP47062 111 aa1.71□□□□□ -2.13
CLN3YAL040C ATG39Q06159 398 aa1.71□□□□□ -2.13
CLN3YAL040C FSF1Q12029 327 aaKnown RBP1.71□□□□□ -2.13
CLN3YAL040C PPT2Q12036 173 aa1.71□□□□□ -2.13
CLN3YAL040C DAD1Q12248 94 aa1.71□□□□□ -2.13
CLN3YAL040C DFM1Q12743 341 aaKnown RBP1.71□□□□□ -2.13
CLN3YAL040C TSC3Q3E790 80 aa1.71□□□□□ -2.13
CLN3YAL040C YOR011W-AQ3E807 68 aa1.71□□□□□ -2.13
CLN3YAL040C YOR020W-AQ3E824 90 aa1.71□□□□□ -2.13
CLN3YAL040C YPR014CQ6B0W2 109 aa1.71□□□□□ -2.13
CLN3YAL040C HMRA1P0CY11 126 aa1.71□□□□□ -2.14
CLN3YAL040C GSP1P32835 219 aaKnown RBP1.71□□□□□ -2.14
CLN3YAL040C GSP2P32836 220 aaKnown RBP1.71□□□□□ -2.14
CLN3YAL040C YGL088WP53151 121 aa1.71□□□□□ -2.14
CLN3YAL040C THG1P53215 237 aaKnown RBP1.71□□□□□ -2.14
CLN3YAL040C YMR244WQ04018 355 aa1.71□□□□□ -2.14
CLN3YAL040C CUE4Q04201 117 aaPredicted RBP1.71□□□□□ -2.14
CLN3YAL040C YDR115WQ04598 105 aa1.71□□□□□ -2.14
CLN3YAL040C YMR320WQ04897 101 aa1.71□□□□□ -2.14
CLN3YAL040C YBL112CQ3E7Y4 105 aa1.71□□□□□ -2.14
CLN3YAL040C RPL2AP0CX45 254 aaKnown RBP1.7□□□□□ -2.14
CLN3YAL040C RPL2BP0CX46 254 aaKnown RBP1.7□□□□□ -2.14
CLN3YAL040C MIG1P27705 504 aa1.7□□□□□ -2.14
CLN3YAL040C MRPL11P36521 249 aaPredicted RBP1.7□□□□□ -2.14
CLN3YAL040C YHR022CP38763 256 aa1.7□□□□□ -2.14
CLN3YAL040C MIG3P39943 394 aa1.7□□□□□ -2.14
CLN3YAL040C YPI1P43587 155 aa1.7□□□□□ -2.14
CLN3YAL040C IGD1P43598 195 aa1.7□□□□□ -2.14
CLN3YAL040C YGL118CP53132 145 aa1.7□□□□□ -2.14
CLN3YAL040C BRP1P53194 125 aa1.7□□□□□ -2.14
CLN3YAL040C ECM19Q06011 112 aa1.7□□□□□ -2.14
CLN3YAL040C YPL162CQ12042 273 aa1.7□□□□□ -2.14
CLN3YAL040C TDA8Q6B2U8 126 aa1.7□□□□□ -2.14
CLN3YAL040C YHR212W-AP0CX91 67 aa1.69□□□□□ -2.14
CLN3YAL040C SCM4P32564 187 aa1.69□□□□□ -2.14
CLN3YAL040C SNF11P38956 169 aa1.69□□□□□ -2.14
CLN3YAL040C YER135CP40082 130 aa1.69□□□□□ -2.14
CLN3YAL040C SPI1P40092 148 aa1.69□□□□□ -2.14
CLN3YAL040C GLC8P41818 229 aa1.69□□□□□ -2.14
CLN3YAL040C LSM8P47093 109 aaKnown RBP1.69□□□□□ -2.14
CLN3YAL040C YPR063CQ12160 140 aa1.69□□□□□ -2.14
CLN3YAL040C YLR342W-AQ3E810 57 aa1.69□□□□□ -2.14
CLN3YAL040C SCS22Q6Q595 175 aa1.69□□□□□ -2.14
CLN3YAL040C ADH1P00330 348 aaKnown RBP1.69□□□□□ -2.14
CLN3YAL040C Q0255P03881 472 aa1.69□□□□□ -2.14
CLN3YAL040C PRE1P22141 198 aaKnown RBP1.69□□□□□ -2.14
CLN3YAL040C MRP49P32388 137 aa1.69□□□□□ -2.14
CLN3YAL040C MSA2P36157 363 aa1.69□□□□□ -2.14
CLN3YAL040C PAU7P39545 55 aa1.69□□□□□ -2.14
CLN3YAL040C YPL073CP40323 161 aa1.69□□□□□ -2.14
CLN3YAL040C ERV14P53173 138 aa1.69□□□□□ -2.14
CLN3YAL040C YIL014C-AQ02598 104 aa1.69□□□□□ -2.14
CLN3YAL040C COF1Q03048 143 aaKnown RBP1.69□□□□□ -2.14
CLN3YAL040C MRPS8Q03799 155 aa1.69□□□□□ -2.14
CLN3YAL040C RUB1Q03919 77 aa1.69□□□□□ -2.14
CLN3YAL040C GPI19Q04082 140 aa1.69□□□□□ -2.14
CLN3YAL040C RPS22BQ3E7Y3 130 aaKnown RBP1.69□□□□□ -2.14
CLN3YAL040C ISD11Q6Q560 94 aa1.69□□□□□ -2.14
CLN3YAL040C YFR032C-BQ8TGU2 87 aa1.69□□□□□ -2.14
CLN3YAL040C YOR304C-AO14468 76 aa1.68□□□□□ -2.14
CLN3YAL040C YPR170W-BP0C5R9 85 aa1.68□□□□□ -2.14
CLN3YAL040C BET1P22804 142 aa1.68□□□□□ -2.14
CLN3YAL040C YBL081WP38180 368 aaKnown RBP1.68□□□□□ -2.14
CLN3YAL040C CNL1Q06333 122 aa1.68□□□□□ -2.14
CLN3YAL040C NAT5Q08689 176 aa1.68□□□□□ -2.14
CLN3YAL040C PRM3Q08931 133 aa1.68□□□□□ -2.14
CLN3YAL040C CCW12Q12127 133 aa1.68□□□□□ -2.14
CLN3YAL040C YLR412C-AQ3E742 68 aa1.68□□□□□ -2.14
CLN3YAL040C SLO1Q3E784 85 aa1.68□□□□□ -2.14
CLN3YAL040C YNL146C-AQ3E7Z1 64 aa1.68□□□□□ -2.14
CLN3YAL040C FUN14P18411 198 aa1.67□□□□□ -2.14
CLN3YAL040C YHR140WP38842 239 aa1.67□□□□□ -2.14
CLN3YAL040C RRT13P40042 185 aa1.67□□□□□ -2.14
CLN3YAL040C POP3P53833 195 aaPredicted RBP1.67□□□□□ -2.14
CLN3YAL040C YDR366CP87287 132 aa1.67□□□□□ -2.14
CLN3YAL040C YOR097CQ12274 175 aaPredicted RBP1.67□□□□□ -2.14
CLN3YAL040C YBR200W-AQ3E755 54 aa1.67□□□□□ -2.14
CLN3YAL040C YAL067W-AQ8TGK6 75 aa1.67□□□□□ -2.14
CLN3YAL040C VAR1P02381 398 aa1.66□□□□□ -2.14
CLN3YAL040C YLR156WP0CE96 114 aa1.66□□□□□ -2.14
CLN3YAL040C YLR159WP0CE97 114 aa1.66□□□□□ -2.14
CLN3YAL040C YLR161WP0CE98 114 aa1.66□□□□□ -2.14
CLN3YAL040C SEC11P15367 167 aa1.66□□□□□ -2.14
CLN3YAL040C PAU16P35994 123 aa1.66□□□□□ -2.14
CLN3YAL040C FYV4P38783 130 aaPredicted RBP1.66□□□□□ -2.14
CLN3YAL040C OST2P46964 130 aa1.66□□□□□ -2.14
CLN3YAL040C YGR039WP53225 103 aa1.66□□□□□ -2.14
CLN3YAL040C UPS3Q04006 179 aa1.66□□□□□ -2.14
CLN3YAL040C YDL157CQ12082 118 aa1.66□□□□□ -2.14
CLN3YAL040C COA6Q3E846 104 aa1.66□□□□□ -2.14
CLN3YAL040C YGR035W-AQ45U48 73 aa1.66□□□□□ -2.14
CLN3YAL040C ATP5P09457 212 aa1.66□□□□□ -2.14
CLN3YAL040C YDL022C-AP0C5L6 82 aa1.66□□□□□ -2.14
CLN3YAL040C HMRA2P0CY13 119 aa1.66□□□□□ -2.14
CLN3YAL040C ATP15P21306 62 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms