RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SPACA7Q96KW9 195 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 MYRFLQ96LU7 910 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 UBL7Q96S82 380 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-212ENST00000641247 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-212ENST00000641247 ZDHHC9Q9Y397 364 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 KIF3AQ9Y496 699 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 PCDHB9Q9Y5E1 797 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 PTPRDP23468 1912 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 BPTFQ12830 3046 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PP2D1A8MPX8 630 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 LEFTY2O00292 366 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 TRIM24O15164 1050 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 ATXN7O15265 892 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-212ENST00000641247 AP5Z1O43299 807 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 HCRTO43612 131 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 STX6O43752 255 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 KAT7O95251 611 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CKMP06732 381 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CSH1P0DML2 217 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CSH2P0DML3 217 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 TCF3P15923 654 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CDC25AP30304 524 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 WASP42768 502 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 BNC1Q01954 994 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 RAD51AP2Q09MP3 1159 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CCDC173Q0VFZ6 552 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 NR1H3Q13133 447 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PKP1Q13835 747 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 DHCR24Q15392 516 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 ZPBP2Q6X784 338 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 FILIP1Q7Z7B0 1213 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 ZNF605Q86T29 641 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PHTF2Q8N3S3 785 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 TRIML1Q8N9V2 468 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 FAM184AQ8NB25 1140 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 BAHD1Q8TBE0 780 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-212ENST00000641247 C2orf15Q8WU43 125 aaKnown RBP10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PNKPQ96T60 521 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PYM1Q9BRP8 204 aaKnown RBP10.44□□□□□ -0.74
PHGDH-212ENST00000641247 RNF38Q9H0F5 515 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 SLC6A17Q9H1V8 727 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PRORYQ9H606 182 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CD248Q9HCU0 757 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 CALCOCO1Q9P1Z2 691 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 ARHGAP26Q9UNA1 814 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 PCDHB5Q9Y5E4 795 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 ADAMTS9Q9P2N4 1935 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 MAST4O15021 2626 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 MYO16Q9Y6X6 1858 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 KIAA1549LQ6ZVL6 1849 aa10.44□□□□□ -0.74
PHGDH-212ENST00000641247 TRAV19A0A0A6YYK7 116 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 A0A1W2PQF6 199 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 PYCARD-AS1I3L0S3 204 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 NFATC1O95644 943 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 SYPP08247 313 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 OR52Z1P0C646 297 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 HDCP19113 662 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 MUTP22033 750 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 DPP6P42658 865 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 USP46P62068 366 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 GRIK2Q13002 908 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 IL17AQ16552 155 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 EOGTQ5NDL2 527 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 OSTM1Q86WC4 334 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 CCDC26Q8TAB7 109 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 ERMNQ8TAM6 284 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 SPIRE2Q8WWL2 714 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 FAM212AQ96EL1 285 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 TRMT2BQ96GJ1 504 aaKnown RBP10.43□□□□□ -0.74
PHGDH-212ENST00000641247 ZNF419Q96HQ0 510 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-212ENST00000641247 HSPA12BQ96MM6 686 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 DCBLD2Q96PD2 775 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 GBP4Q96PP9 640 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 PNMA5Q96PV4 448 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 ACOX2Q99424 681 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 PKMYT1Q99640 499 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 TMEM206Q9H813 350 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 CPSF3Q9UKF6 684 aaKnown RBP10.43□□□□□ -0.74
PHGDH-212ENST00000641247 APOBEC2Q9Y235 224 aaKnown RBP10.43□□□□□ -0.74
PHGDH-212ENST00000641247 GON4LQ3T8J9 2241 aa10.43□□□□□ -0.74
PHGDH-212ENST00000641247 URB1O60287 2271 aaKnown RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 NPHP3-ACAD11A0A0J9YXS1 232 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 MYMKA6NI61 221 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 GOLGA6L22H0YM25 854 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 TK2O00142 265 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 ZSCAN22P10073 491 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 PLS3P13797 630 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 ACAT1P24752 427 aaKnown RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 MSNP26038 577 aaKnown RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 ATP2C1P98194 919 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-212ENST00000641247 KDSRQ06136 332 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 SMARCB1Q12824 385 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 STRN3Q13033 797 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 PLEKHG6Q3KR16 790 aa10.42□□□□□ -0.74
PHGDH-212ENST00000641247 SLC39A4Q6P5W5 647 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms