RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KBTBD13C9JR72 458 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 K7ERI5 159 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 LRCH4O75427 683 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 LSM8O95777 96 aaKnown RBP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 AMPD1P23109 780 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 CCND2P30279 289 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 ERFP50548 548 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 THOC5Q13769 683 aaKnown RBP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 SLC30A9Q6PML9 568 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 SCARA5Q6ZMJ2 495 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 BBS12Q6ZW61 710 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 KBTBD2Q8IY47 623 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 KIAA0319LQ8IZA0 1049 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 DEPTORQ8TB45 409 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 GPRASP2Q96D09 838 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 ONECUT3O60422 494 aaPredicted RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 DKC1O60832 514 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 STAM2O75886 525 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 FAM155BO75949 473 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 TGDSO95455 350 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 INHBAP08476 426 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 RARBP10826 455 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SKIP12755 728 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 KDELR1P24390 212 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 TNFSF9P41273 254 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 INHBEP58166 350 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 MYL6P60660 151 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 ACTR2P61160 394 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 YWHAGP61981 247 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SLC18A2Q05940 514 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 KRT72Q14CN4 511 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 OR52E8Q6IFG1 317 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 STYK1Q6J9G0 422 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 CDHR3Q6ZTQ4 885 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SH2D5Q6ZV89 423 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 POLNQ7Z5Q5 900 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 EMC1Q8N766 993 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 VCXQ9H320 206 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 JPH1Q9HDC5 661 aaPredicted RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 CISHQ9NSE2 258 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 CNTN3Q9P232 1028 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 STX18Q9P2W9 335 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SLC9A2Q9UBY0 812 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 STRIP2Q9ULQ0 834 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 C2CD2Q9Y426 696 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 IKBKGQ9Y6K9 419 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SRCAPQ6ZRS2 3230 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 KIAA1217Q5T5P2 1943 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 A0A0B4J269 797 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 ASS1P00966 412 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 PGM1P36871 562 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SERPINB4P48594 390 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 EIF3EP60228 445 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SARNPP82979 210 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 ZNF200P98182 395 aaPredicted RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 TAF5Q15542 800 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 PTPN20Q4JDL3 420 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 MDH1BQ5I0G3 518 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SLFN12LQ6IEE8 588 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 RFX6Q8HWS3 928 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 FBXO27Q8NI29 283 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SLC44A1Q8WWI5 657 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 FAM161BQ96MY7 647 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 MECRQ9BV79 373 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 MTMR12Q9C0I1 747 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 PAPOLBQ9NRJ5 636 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 PCSK1NQ9UHG2 260 aa11.41□□□□□ -0.58
SNIP1-204ENST00000638725 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.41□□□□□ -0.58
SNIP1-204ENST00000638725 H3BRJ5 948 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 PIGRP01833 764 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 ENO1P06733 434 aaKnown RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 PAPOLAP51003 745 aaKnown RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 TGFB2P61812 414 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 TAP1Q03518 808 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 AP1B1Q10567 949 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 DPYSL3Q14195 570 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 DENND1BQ6P3S1 775 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 PRPF39Q86UA1 669 aaKnown RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 TREML1Q86YW5 311 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 CFAP61Q8NHU2 1237 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 LPAR1Q92633 364 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 MMADHCQ9H3L0 296 aaPredicted RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 KRT82Q9NSB4 513 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 SCOCQ9UIL1 159 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 ADGRA2Q96PE1 1338 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 B2RBV5 119 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 AVILO75366 819 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 RBP3P10745 1247 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 KRT3P12035 628 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 KCNA3P22001 575 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 XKR3Q5GH77 459 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms