RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ATXN2LQ8WWM7 1075 aaKnown RBP10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 HPS1Q92902 700 aa10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 PLEKHG4BQ96PX9 1271 aa10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 KIFC1Q9BW19 673 aa10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 WDR12Q9GZL7 423 aaKnown RBP10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 CCSER2Q9H7U1 834 aa10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 PARVAQ9NVD7 372 aa10.06□□□□□ -0.8
CACNA1A-242ENST00000637485 SYNDIG1LA6NDD5 238 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 EIF2AK2P19525 551 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 FASP25445 335 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 MTMR1Q13613 665 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 QPRTQ15274 297 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 RNF135Q8IUD6 432 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 POLR1BQ9H9Y6 1135 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 HSPBP1Q9NZL4 362 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 PFDN2Q9UHV9 154 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ATP8B3O60423 1300 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 AFF2P51816 1311 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 SRRM3A6NNA2 597 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 PEX1O43933 1283 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ATP6V1C1P21283 382 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 IL12AP29459 219 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 SPRP35270 261 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CASP4P49662 377 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 MXD4Q14582 209 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 PDIA6Q15084 440 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 NKX1-1Q15270 411 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 KNOP1Q1ED39 458 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 LRRC17Q8N6Y2 441 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 SLC44A5Q8NCS7 719 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 RNASE11Q8TAA1 199 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 OSCP1Q8WVF1 389 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 RASSF5Q8WWW0 418 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CAVIN3Q969G5 261 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 SAR1AQ9NR31 198 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ATP12AP54707 1039 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 RAB15P59190 212 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 EFR3AQ14156 821 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CDO1Q16878 200 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 GATAD2AQ86YP4 633 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 KRT35Q92764 455 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 IFT43Q96FT9 208 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 HES6Q96HZ4 224 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 MAP3K14Q99558 947 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CCSER1Q9C0I3 900 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 AP5M1Q9H0R1 490 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ENTPD7Q9NQZ7 604 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 HOXC10Q9NYD6 342 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ERAP1Q9NZ08 941 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 WARSP23381 471 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CCNCP24863 283 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ZSWIM7Q19AV6 140 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 KCNT1Q5JUK3 1230 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ELOA2Q8IYF1 753 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 COX4I2Q96KJ9 171 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 HEXIM2Q96MH2 286 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 CITED4Q96RK1 184 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 ILKAPQ9H0C8 392 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 FBXO9Q9UK97 447 aaPredicted RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
CACNA1A-242ENST00000637485 K7ERI5 159 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 HUS1O60921 280 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 ALDH5A1P51649 535 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TRAP1Q12931 704 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 NFIXQ14938 502 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 NFIL3Q16649 462 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 XXYLT1Q8NBI6 393 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 FRMD8Q9BZ67 464 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TASP1Q9H6P5 420 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 INTS13Q9NVM9 706 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 DMTF1Q9Y222 760 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 ZBTB39O15060 712 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 FAM20BO75063 409 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 CD58P19256 250 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TOP3AQ13472 1001 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 QRICH1Q2TAL8 776 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 ZNF284Q2VY69 593 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 AKIRIN2Q53H80 203 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 SRBD1Q8N5C6 995 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 MSL3Q8N5Y2 521 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 MRPL48Q96GC5 212 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 FAM193BQ96PV7 902 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 EFCAB10A6NFE3 127 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms