RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 DBX2Q6ZNG2 339 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 LRRC69Q6ZNQ3 347 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 FILIP1Q7Z7B0 1213 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 RHBDD1Q8TEB9 315 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 ZNF274Q96GC6 653 aaPredicted RBP14.97□□□□□ -0.01
SNX1-214ENST00000625244 MYRFLQ96LU7 910 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 CDC6Q99741 560 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 GAREM1Q9H706 876 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 TM7SF3Q9NS93 570 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 UXTQ9UBK9 157 aaPredicted RBP14.97□□□□□ -0.01
SNX1-214ENST00000625244 PCDHB5Q9Y5E4 795 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.97□□□□□ -0.01
SNX1-214ENST00000625244 CABIN1Q9Y6J0 2220 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 TEX51A0A1B0GUA7 166 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 CAPN8A6NHC0 703 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 LEFTY2O00292 366 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 PIRO00625 290 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 CYB561D2O14569 222 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 SCAMP3O14828 347 aaKnown RBP14.96□□□□□ -0.01
SNX1-214ENST00000625244 CLDN3O15551 220 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 CILPO75339 1184 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 ZNF883P0CG24 379 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 HDCP19113 662 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 EIF2DP41214 584 aaKnown RBP14.96□□□□□ -0.01
SNX1-214ENST00000625244 TNFRSF4P43489 277 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 PPP2R3AQ06190 1150 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 RESTQ13127 1097 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 KCNB1Q14721 858 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 WSCD1Q658N2 575 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 GPR155Q7Z3F1 870 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 METTL23Q86XA0 190 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 THEM5Q8N1Q8 247 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 BOD1L1Q8NFC6 3051 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 ERLEC1Q96DZ1 483 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.01
SNX1-214ENST00000625244 DACH1Q9UI36 760 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 DSEQ9UL01 958 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 BTBD3Q9Y2F9 522 aa14.96□□□□□ -0.01
SNX1-214ENST00000625244 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
SNX1-214ENST00000625244 UBR5O95071 2799 aaPredicted RBP14.96□□□□□ -0.02
SNX1-214ENST00000625244 MUC22E2RYF6 1773 aaPredicted RBP14.96□□□□□ -0.02
SNX1-214ENST00000625244 A0A1W2PQF6 199 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 BTBD18B2RXH4 712 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 E9PAM4 449 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 XPOTO43592 962 aaKnown RBP14.95□□□□□ -0.02
SNX1-214ENST00000625244 HIP1RO75146 1068 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 ZNF217O75362 1048 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 NDUFV2P19404 249 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 CYP2F1P24903 491 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 WASP42768 502 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 ATP2C1P98194 919 aaPredicted RBP14.95□□□□□ -0.02
SNX1-214ENST00000625244 BNC1Q01954 994 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 SEMG2Q02383 582 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 MYO1EQ12965 1108 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 ENOX2Q16206 610 aaKnown RBP14.95□□□□□ -0.02
SNX1-214ENST00000625244 CCDC157Q569K6 752 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 WDR45BQ5MNZ6 344 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 RHBDF2Q6PJF5 856 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 DCP1BQ8IZD4 617 aaKnown RBP14.95□□□□□ -0.02
SNX1-214ENST00000625244 PHTF2Q8N3S3 785 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 ERMNQ8TAM6 284 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 HCN2Q9UL51 889 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 ANK1P16157 1881 aa14.95□□□□□ -0.02
SNX1-214ENST00000625244 A0A1B0GTW7 788 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 ANO9A1A5B4 782 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 SFI1A8K8P3 1242 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 NDUFS2O75306 463 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 HOXB2P14652 356 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 PAX3P23760 479 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 MATR3P43243 847 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX1-214ENST00000625244 STRN3Q13033 797 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 MAPK7Q13164 816 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 HLA-BQ31612 363 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 JADE1Q6IE81 842 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 DHRS13Q6UX07 377 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 RUFY3Q7L099 469 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 MIB1Q86YT6 1006 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 ZCCHC9Q8N567 271 aaKnown RBP14.94□□□□□ -0.02
SNX1-214ENST00000625244 ZNF513Q8N8E2 541 aaPredicted RBP14.94□□□□□ -0.02
SNX1-214ENST00000625244 FAM181AQ8N9Y4 354 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 PYM1Q9BRP8 204 aaKnown RBP14.94□□□□□ -0.02
SNX1-214ENST00000625244 SEMA4CQ9C0C4 833 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 SLC6A17Q9H1V8 727 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 CD248Q9HCU0 757 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX1-214ENST00000625244 NBPF19A0A087WUL8 3843 aa14.94□□□□□ -0.02
SNX1-214ENST00000625244 MYOFQ9NZM1 2061 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 FLRT2O43155 660 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 RRP8O43159 456 aaKnown RBP14.93□□□□□ -0.02
SNX1-214ENST00000625244 FAM189A1O60320 539 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 ADRB2P07550 413 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 NFICP08651 508 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 PSMA5P28066 241 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 MCM7P33993 719 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 MATKP42679 507 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 PTPRNQ16849 979 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 ZPBP2Q6X784 338 aa14.93□□□□□ -0.02
SNX1-214ENST00000625244 DNASE2BQ8WZ79 361 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms