RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 PCDHB11Q9Y5F2 797 aa7.05□□□□□ -1.28
CDKL5-204ENST00000623364 PCDHGA7Q9Y5G6 932 aa7.05□□□□□ -1.28
CDKL5-204ENST00000623364 PCDHA8Q9Y5H6 950 aa7.05□□□□□ -1.28
CDKL5-204ENST00000623364 PRRC2CQ9Y520 2896 aaKnown RBP7.05□□□□□ -1.28
CDKL5-204ENST00000623364 SHANK1Q9Y566 2161 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 PNMA6FA0A0J9YX94 578 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 BTBD18B2RXH4 712 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 PRSS44E7EML9 344 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 I3L4J1 428 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 ZNF213O14771 459 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 RNF113AO15541 343 aaKnown RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 OATP04181 439 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 WNT1P04628 370 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 PSAPP07602 524 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 ZFYP08048 801 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 DDX6P26196 483 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 SMARCA1P28370 1054 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 EPHA8P29322 1005 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 CLCN1P35523 988 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 EIF2DP41214 584 aaKnown RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 WASP42768 502 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 RPL10AP62906 217 aaKnown RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 PPP2R2AP63151 447 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 C14orf28Q4W4Y0 310 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 METTL3Q86U44 580 aaKnown RBP7.04□□□□□ -1.28
CDKL5-204ENST00000623364 JAMLQ86YT9 394 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 KSR1Q8IVT5 923 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 CENPTQ96BT3 561 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 ERLEC1Q96DZ1 483 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 CATSPER2Q96P56 530 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 PIGSQ96S52 555 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 NUP58Q9BVL2 599 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 SLC29A3Q9BZD2 475 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 OSBPL2Q9H1P3 480 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 GABBR1Q9UBS5 961 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 ACSL6Q9UKU0 697 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 SLCO1B1Q9Y6L6 691 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 TGP01266 2768 aa7.04□□□□□ -1.28
CDKL5-204ENST00000623364 KIF26BQ2KJY2 2108 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 MAP1AP78559 2803 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 TBC1D3BA6NDS4 549 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 TCP11X1B4DZS4 312 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 MEIS2O14770 477 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 SYN3O14994 580 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 VILLO15195 856 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 PRICKLE3O43900 615 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 LZTS3O60299 673 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 WT1P19544 449 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 SLC6A11P48066 632 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 ART1P52961 327 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 DUSP4Q13115 394 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 RESTQ13127 1097 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 SHBQ15464 509 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 TAF12Q16514 161 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 HS1BP3Q53T59 392 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 CCDC178Q5BJE1 867 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 ZNF280DQ6N043 979 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 STAG2Q8N3U4 1231 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 CCER1Q8TC90 406 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 NDRG1Q92597 394 aaKnown RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 SLC12A9Q9BXP2 914 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 LINC00597Q9H2U6 94 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 RTN4Q9NQC3 1192 aaKnown RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 ITM2CQ9NQX7 267 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 USP36Q9P275 1121 aaKnown RBP7.03□□□□□ -1.28
CDKL5-204ENST00000623364 STARD13Q9Y3M8 1113 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 MXRA5Q9NR99 2828 aa7.03□□□□□ -1.28
CDKL5-204ENST00000623364 DCHS2Q6V1P9 2916 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 PMS2P1A4D2B8 440 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 JAK2O60674 1132 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 GP1BAP07359 652 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 FOSL1P15407 271 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ATP2B1P20020 1258 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 KLK2P20151 261 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ITGA3P26006 1051 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 BRCC3P46736 316 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 QARSP47897 775 aaKnown RBP7.02□□□□□ -1.29
CDKL5-204ENST00000623364 FAM160A1Q05DH4 1040 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 KDSRQ06136 332 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 MESP2Q0VG99 397 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 FUT2Q10981 343 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ZNF211Q13398 564 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-204ENST00000623364 SEPT6Q14141 434 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 VEPH1Q14D04 833 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 PCBP1Q15365 356 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDKL5-204ENST00000623364 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 SFMBT2Q5VUG0 894 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 SGMS1Q86VZ5 419 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 TGIF2LYQ8IUE0 185 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 CHPFQ8IZ52 775 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 NAGSQ8N159 534 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 HVCN1Q96D96 273 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 ZKSCAN3Q9BRR0 538 aa7.02□□□□□ -1.29
CDKL5-204ENST00000623364 MINDY3Q9H8M7 445 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms