RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
CBWD3-218ENST00000622755 MYH10P35580 1976 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 MIA3Q5JRA6 1907 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 TRIM49BA6NDI0 452 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 AP1G2O75843 785 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 NPR3P17342 541 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 CD58P19256 250 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 TBXAS1P24557 533 aaPredicted RBP13.09□□□□□ -0.31
CBWD3-218ENST00000622755 YWHAQP27348 245 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 ASPAP45381 313 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 FCHO2Q0JRZ9 810 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
CBWD3-218ENST00000622755 PPP2R5DQ14738 602 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 CAMK4Q16566 473 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 TXNDC8Q6A555 127 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 SPOPLQ6IQ16 392 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 CCDC105Q8IYK2 499 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 DTWD2Q8NBA8 298 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 ATOH1Q92858 354 aaPredicted RBP13.09□□□□□ -0.31
CBWD3-218ENST00000622755 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 B3GNT5Q9BYG0 378 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 NACA2Q9H009 215 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.31
CBWD3-218ENST00000622755 KRT82Q9NSB4 513 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 COMMD8Q9NX08 183 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 PIAS3Q9Y6X2 628 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 PTPRDP23468 1912 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 DENND4CQ5VZ89 1909 aa13.09□□□□□ -0.31
CBWD3-218ENST00000622755 FAM170BA6NMN3 283 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 HDCP19113 662 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
CBWD3-218ENST00000622755 INCA1Q0VD86 236 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 NR1H3Q13133 447 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 C1orf220Q5T0J3 134 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 IER5LQ5T953 404 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
CBWD3-218ENST00000622755 CRYBG2Q8N1P7 616 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 OVCA2Q8WZ82 227 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 FAM3CQ92520 227 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 FBXO32Q969P5 355 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 LTB4R2Q9NPC1 389 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 OBSL1O75147 1896 aa13.08□□□□□ -0.32
CBWD3-218ENST00000622755 TICRRQ7Z2Z1 1910 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 CLDN5O00501 218 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 ADORA2BP29275 332 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 IFNAR2P48551 515 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 LRRC32Q14392 662 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 PDGFRLQ15198 375 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 RALGPS2Q86X27 583 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-218ENST00000622755 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
CBWD3-218ENST00000622755 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 SLC2A14Q8TDB8 520 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 CYFIP2Q96F07 1278 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 HEXIM2Q96MH2 286 aaKnown RBP13.07□□□□□ -0.32
CBWD3-218ENST00000622755 NT5C1BQ96P26 610 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 IER2Q9BTL4 223 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 TTLL2Q9BWV7 592 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 NUP62CLQ9H1M0 184 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
CBWD3-218ENST00000622755 NDRG2Q9UN36 371 aaKnown RBP13.07□□□□□ -0.32
CBWD3-218ENST00000622755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
CBWD3-218ENST00000622755 P4HA2O15460 535 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 LAMTOR5O43504 91 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 CILPO75339 1184 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 PRAMEF12O95522 483 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 DCNP07585 359 aaKnown RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 CCDC130P13994 396 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 FMO5P49326 533 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 PMS1P54277 932 aaKnown RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 STX17P56962 302 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 NHLH1Q02575 133 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 GOLGA8FQ08AF8 430 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 GOLGA8DPQ0D2H9 430 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 TAF10Q12962 218 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 ITPRIPL2Q3MIP1 535 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 ZNF394Q53GI3 561 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 ZC3H14Q6PJT7 736 aaKnown RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 FAM114A1Q8IWE2 563 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 CPA6Q8N4T0 437 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 PRSS33Q8NF86 280 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 FOXQ1Q9C009 403 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 SDCBP2Q9H190 292 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 TLR8Q9NR97 1041 aaKnown RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 SPATA6Q9NWH7 488 aaPredicted RBP13.06□□□□□ -0.32
CBWD3-218ENST00000622755 RWDD2AQ9UIY3 292 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
CBWD3-218ENST00000622755 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
CBWD3-218ENST00000622755 H0Y858 1186 aa13.05□□□□□ -0.32
CBWD3-218ENST00000622755 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms