RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RNF169Q8NCN4 708 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 RBM15BQ8NDT2 890 aaKnown RBP7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SLC26A7Q8TE54 656 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 SCYL1Q96KG9 808 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 GORASP1Q9BQQ3 440 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 APOL6Q9BWW8 343 aa7.27□□□□□ -1.25
NEDD9-216ENST00000620854 LAMB1P07942 1786 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MAGEA13PA6NCF6 341 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 E7ENQ6 273 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PIK3R2O00459 728 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CASQ2O14958 399 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TOM1L1O75674 476 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TCEA3O75764 348 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MTA2O94776 668 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 LYNP07948 512 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PPM1FP49593 454 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 BPIFB4P59827 614 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PSMC5P62195 406 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 DEUP1Q05D60 604 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PEX6Q13608 980 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 BMPR2Q13873 1038 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 LBRQ14739 615 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ARHGEF6Q15052 776 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 FKBP1CQ5VVH2 108 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 LPCAT4Q643R3 524 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SYDE1Q6ZW31 735 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 RASSF3Q86WH2 238 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TREML1Q86YW5 311 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 C7orf31Q8N865 590 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MCUQ8NE86 351 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 GSTCDQ8NEC7 633 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SERAC1Q96JX3 654 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 DNAJC1Q96KC8 554 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TRIM56Q9BRZ2 755 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 IFT122Q9HBG6 1241 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 EURLQ9NYK6 297 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 FIS1Q9Y3D6 152 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ASB3Q9Y575 518 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ACTL7BQ9Y614 415 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CLUHO75153 1309 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 M0QZ92 97 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 GIPC1O14908 333 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MAGEB2O15479 319 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PRPF4O43172 522 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CST8O60676 142 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 GMNNO75496 209 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PDE5AO76074 875 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TNNC2P02585 160 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 UNGP13051 313 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 NPTX2P47972 431 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 HIRAP54198 1017 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SLC25A3Q00325 362 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CENPCQ03188 943 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PTK7Q13308 1070 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CDO1Q16878 200 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 KBTBD12Q3ZCT8 623 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 RIPOR1Q6ZS17 1223 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 RGS9BPQ6ZS82 235 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PRPF39Q86UA1 669 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TRIM50Q86XT4 487 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SLC9A9Q8IVB4 645 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ACTL9Q8TC94 416 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SLCO2A1Q92959 643 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 OXNAD1Q96HP4 312 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ZNF668Q96K58 619 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TMEM8AQ9HCN3 771 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TBC1D22BQ9NU19 505 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 RABGEF1Q9UJ41 708 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PPM1HQ9ULR3 514 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TBX20Q9UMR3 447 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 AFG3L2Q9Y4W6 797 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PCDHB2Q9Y5E7 798 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 UMODL1Q5DID0 1318 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MYPNQ86TC9 1320 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 TRPA1O75762 1119 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 OR6B1O95007 311 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 P4HBP07237 508 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 PSAPP07602 524 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MUTP22033 750 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 QARSP47897 775 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SCNN1BP51168 640 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 RTP1P59025 263 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SEPT6Q14141 434 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 UBAP2LQ14157 1087 aaKnown RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 RPS6KA2Q15349 733 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CDHR3Q6ZTQ4 885 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ARHGAP22Q7Z5H3 698 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 CCNYQ8ND76 341 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MTBPQ96DY7 904 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 ZBTB45Q96K62 511 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-216ENST00000620854 MMP19Q99542 508 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 NDNQ99608 321 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 NDE1Q9NXR1 346 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 HESX1Q9UBX0 185 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 FAM198AQ9UFP1 575 aa7.26□□□□□ -1.25
NEDD9-216ENST00000620854 SIGLEC16A6NMB1 481 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 NFIBO00712 420 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ZMPSTE24O75844 475 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SLC1A1P43005 524 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms