RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 ASTN2O75129 1339 aaPredicted RBP11.19□□□□□ -0.62
CPEB1-215ENST00000617958 UBE4BO95155 1302 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 CAPNS1P04632 268 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 GSTT2P0CG29 244 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 GSTT2BP0CG30 244 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 COL6A2P12110 1019 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 PRDX6P30041 224 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 BTDP43251 543 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 TMED10P49755 219 aaKnown RBP11.19□□□□□ -0.62
CPEB1-215ENST00000617958 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 NFIAQ12857 509 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 TRIP13Q15645 432 aaPredicted RBP11.19□□□□□ -0.62
CPEB1-215ENST00000617958 DALRD3Q5D0E6 543 aaKnown RBP11.19□□□□□ -0.62
CPEB1-215ENST00000617958 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 ALYREFQ86V81 257 aaKnown RBP11.19□□□□□ -0.62
CPEB1-215ENST00000617958 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 APOPT1Q96IL0 206 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 PSMD13Q9UNM6 376 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 QSER1Q2KHR3 1735 aa11.19□□□□□ -0.62
CPEB1-215ENST00000617958 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
CPEB1-215ENST00000617958 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ATMINO43313 823 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 FAM189A1O60320 539 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 C8BP07358 591 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ALDH1A3P47895 512 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ADCY7P51828 1080 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 TCP10Q12799 353 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ZNF362Q5T0B9 420 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 NIPAL1Q6NVV3 410 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 SLC2A7Q6PXP3 512 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 PRPF39Q86UA1 669 aaKnown RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 TICAM1Q8IUC6 712 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 SLC26A7Q8TE54 656 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 SLC20A1Q8WUM9 679 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ATG4AQ8WYN0 398 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 EFHD2Q96C19 240 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ANO3Q9BYT9 981 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 UNKQ9C0B0 810 aaKnown RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 PPARGC1AQ9UBK2 798 aaKnown RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ITGA11Q9UKX5 1188 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 CDH7Q9ULB5 785 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 MYH11P35749 1972 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 RSPH10B2B2RC85 870 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ADAM23O75077 832 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 RSPH10BP0C881 870 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 TUBA4AP68366 448 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ZNF200P98182 395 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 MYL7Q01449 175 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ZNF829Q3KNS6 432 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 MFSD4BQ5TF39 518 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 CCDC33Q8N5R6 958 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ADCY4Q8NFM4 1077 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 PPP1R10Q96QC0 940 aaKnown RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 NEURL2Q9BR09 285 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 SLC2A11Q9BYW1 496 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 COA1Q9GZY4 146 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 ACSS3Q9H6R3 686 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
CPEB1-215ENST00000617958 VPS45Q9NRW7 570 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 INPP5FQ9Y2H2 1132 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 DAGLAQ9Y4D2 1042 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 HEY1Q9Y5J3 304 aa11.18□□□□□ -0.62
CPEB1-215ENST00000617958 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 H0YJX3 145 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 H3BSA7 217 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 CRTAMO95727 393 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 SRGAP2BP0DMP2 458 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 RAG1P15918 1043 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 GAP43P17677 238 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 HMOX2P30519 316 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
CPEB1-215ENST00000617958 NOP14P78316 857 aaKnown RBP11.17□□□□□ -0.62
CPEB1-215ENST00000617958 PDIA2Q13087 525 aaKnown RBP11.17□□□□□ -0.62
CPEB1-215ENST00000617958 CNGA3Q16281 694 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 LRRC36Q1X8D7 754 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 GRAMD1BQ3KR37 738 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
CPEB1-215ENST00000617958 ATG16L1Q676U5 607 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 DCDC5Q6ZRR9 648 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 NANOGNBQ7Z5D8 188 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 PQLC1Q8N2U9 271 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 LMO3Q8TAP4 145 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 CHPT1Q8WUD6 406 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 GCNAQ96QF7 691 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 NACA2Q9H009 215 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 RIOX1Q9H6W3 641 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
CPEB1-215ENST00000617958 TMEM260Q9NX78 707 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms