RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 ZNF77Q15935 545 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 LPAL2Q16609 132 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 TMEM196Q5HYL7 178 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 HEATR6Q6AI08 1181 aaKnown RBP12.46□□□□□ -0.41
SYMPK-216ENST00000601582 FSTL4Q6MZW2 842 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 DENND5BQ6ZUT9 1274 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 B3GNT5Q9BYG0 378 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 LINC00597Q9H2U6 94 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 SMYD3Q9H7B4 428 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 DCHS1Q96JQ0 3298 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 PDXKO00764 312 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 TRDMT1O14717 391 aaKnown RBP12.45□□□□□ -0.42
SYMPK-216ENST00000601582 TRIM66O15016 1216 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 RPN1P04843 607 aaKnown RBP12.45□□□□□ -0.42
SYMPK-216ENST00000601582 ANXA13P27216 316 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 GJA4P35212 333 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 SYKP43405 635 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 RAP1GAPP47736 663 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 NDUFA8P51970 172 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 KRT85P78386 507 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 PDGFRLQ15198 375 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 SLC9A9Q8IVB4 645 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 GOLGA5Q8TBA6 731 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 OSCP1Q8WVF1 389 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 SYAP1Q96A49 352 aaPredicted RBP12.45□□□□□ -0.42
SYMPK-216ENST00000601582 C8orf48Q96LL4 319 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 TTLL2Q9BWV7 592 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 RNF38Q9H0F5 515 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 SDCBP2Q9H190 292 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 POLR3BQ9NW08 1133 aaPredicted RBP12.45□□□□□ -0.42
SYMPK-216ENST00000601582 DUS2Q9NX74 493 aaKnown RBP12.45□□□□□ -0.42
SYMPK-216ENST00000601582 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 WNT6Q9Y6F9 365 aa12.45□□□□□ -0.42
SYMPK-216ENST00000601582 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
SYMPK-216ENST00000601582 FAM237AA0A1B0GTK4 181 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 PAPSS2O95340 614 aaPredicted RBP12.44□□□□□ -0.42
SYMPK-216ENST00000601582 EGFP01133 1207 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 NR3C1P04150 777 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 TGM1P22735 817 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 NOP14P78316 857 aaKnown RBP12.44□□□□□ -0.42
SYMPK-216ENST00000601582 GRSF1Q12849 480 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYMPK-216ENST00000601582 IFRD2Q12894 506 aaPredicted RBP12.44□□□□□ -0.42
SYMPK-216ENST00000601582 TAF10Q12962 218 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 USP4Q13107 963 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 NCOA4Q13772 614 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 KCNB1Q14721 858 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 ZNF699Q32M78 642 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 EML3Q32P44 896 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 PRR23BQ6ZRT6 265 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 PAQR9Q6ZVX9 377 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 LONP2Q86WA8 852 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 B3GALNT2Q8NCR0 500 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 TMEM174Q8WUU8 243 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 CEP295NLQ96MC4 621 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 KCNK16Q96T55 309 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 VRTNQ9H8Y1 702 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 TRPM5Q9NZQ8 1165 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 ARHGAP26Q9UNA1 814 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
SYMPK-216ENST00000601582 CLSTN1O94985 981 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 ABL1P00519 1130 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 IFNAR2P48551 515 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 PXNP49023 591 aaPredicted RBP12.43□□□□□ -0.42
SYMPK-216ENST00000601582 AP3M2P53677 418 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 SIM2Q14190 667 aaPredicted RBP12.43□□□□□ -0.42
SYMPK-216ENST00000601582 CEP135Q66GS9 1140 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 CPA6Q8N4T0 437 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 EZH1Q92800 747 aaPredicted RBP12.43□□□□□ -0.42
SYMPK-216ENST00000601582 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 ELOVL4Q9GZR5 314 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 GOLPH3LQ9H4A5 285 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 PARD6AQ9NPB6 346 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.42
SYMPK-216ENST00000601582 CEP250Q9BV73 2442 aa12.43□□□□□ -0.42
SYMPK-216ENST00000601582 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 LEFTY2O00292 366 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 SCAMP3O14828 347 aaKnown RBP12.42□□□□□ -0.42
SYMPK-216ENST00000601582 RNF40O75150 1001 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 RHOBTB3O94955 611 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 MYL1P05976 194 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 TCF3P15923 654 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 AMPD2Q01433 879 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 SPEM2Q0P670 501 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 DPYDQ12882 1025 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 ORC1Q13415 861 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
SYMPK-216ENST00000601582 SGSM1Q2NKQ1 1148 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 ZACNQ401N2 412 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 SPOPLQ6IQ16 392 aa12.42□□□□□ -0.42
SYMPK-216ENST00000601582 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms