RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 CCZ1P86791 482 aaPredicted RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 CENPCQ03188 943 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 HABP4Q5JVS0 413 aaKnown RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 NAA35Q5VZE5 725 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 PMF1Q6P1K2 205 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 CCDC149Q6ZUS6 474 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 SCN4BQ8IWT1 228 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 KREMEN2Q8NCW0 462 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 C1orf131Q8NDD1 294 aaKnown RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 KCTD13Q8WZ19 329 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 SPATA17Q96L03 361 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 KCNK16Q96T55 309 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 SEPT5Q99719 369 aaPredicted RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 DPP7Q9UHL4 492 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 NAGPAQ9UK23 515 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 NENFQ9UMX5 172 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 EPN1Q9Y6I3 576 aaPredicted RBP15.16■□□□□ 0.02
UPF1-211ENST00000600868 MYO9BQ13459 2157 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 MYO7AQ13402 2215 aa15.16■□□□□ 0.02
UPF1-211ENST00000600868 MYH10P35580 1976 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 HHLA1C9JL84 531 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 TULP2O00295 520 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 PRRG1O14668 218 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 ARHGAP6O43182 974 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 RTN2O75298 545 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 LCA5LO95447 670 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 ACADSBP45954 432 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 ALDH1A3P47895 512 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 NRIP1P48552 1158 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 GFPT1Q06210 699 aaPredicted RBP15.15■□□□□ 0.02
UPF1-211ENST00000600868 PDCLQ13371 301 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 PLD1Q13393 1074 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 KCNC3Q14003 757 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 ACAD10Q6JQN1 1059 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 ALKBH5Q6P6C2 394 aaKnown RBP15.15■□□□□ 0.02
UPF1-211ENST00000600868 RAD9BQ6WBX8 426 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 RBM23Q86U06 439 aaKnown RBP15.15■□□□□ 0.02
UPF1-211ENST00000600868 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 PHF13Q86YI8 300 aaPredicted RBP15.15■□□□□ 0.02
UPF1-211ENST00000600868 MSANTD4Q8NCY6 345 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 CPA5Q8WXQ8 436 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 SLC4A5Q9BY07 1137 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 ISCUQ9H1K1 167 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 CYTH4Q9UIA0 394 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 YIPF1Q9Y548 306 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 INSL5Q9Y5Q6 135 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 HCFC2Q9Y5Z7 792 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 MTCH2Q9Y6C9 303 aa15.15■□□□□ 0.02
UPF1-211ENST00000600868 MTCL1Q9Y4B5 1905 aaKnown RBP15.15■□□□□ 0.02
UPF1-211ENST00000600868 EIF3CLB5ME19 914 aaKnown RBP15.14■□□□□ 0.01
UPF1-211ENST00000600868 NDUFA10O95299 355 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 SPATA31D3P0C874 917 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 EPCAMP16422 314 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 MMP8P22894 467 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 NSFP46459 744 aaKnown RBP15.14■□□□□ 0.01
UPF1-211ENST00000600868 SNX16P57768 344 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 ADGRE1Q14246 886 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 MTF1Q14872 753 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 DDR2Q16832 855 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 TCEAL5Q5H9L2 206 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 RAB41Q5JT25 222 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 C10orf76Q5T2E6 689 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 LIN9Q5TKA1 542 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 ELMSAN1Q6PJG2 1045 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 SPATA31D4Q6ZUB0 917 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 TMEM110Q86TL2 294 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 ERICH1Q86X53 443 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 SLC7A14Q8TBB6 771 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 VCPIP1Q96JH7 1222 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 PPP1R13BQ96KQ4 1090 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 CPXM1Q96SM3 734 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 EIF3CQ99613 913 aaKnown RBP15.14■□□□□ 0.01
UPF1-211ENST00000600868 MIS12Q9H081 205 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 KCNF1Q9H3M0 494 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 MAN1C1Q9NR34 630 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 SPTLC3Q9NUV7 552 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 COMMD8Q9NX08 183 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 TAS2R14Q9NYV8 317 aa15.14■□□□□ 0.01
UPF1-211ENST00000600868 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 TMCO5BA8MYB1 307 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 TNFRSF10BO14763 440 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 ZNF263O14978 683 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 ZMYND10O75800 440 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 GABBR2O75899 941 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 SOAT2O75908 522 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 FTLP02792 175 aaPredicted RBP15.13■□□□□ 0.01
UPF1-211ENST00000600868 C8AP07357 584 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 ATF6P18850 670 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 HOXA9P31269 272 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 GABRB2P47870 512 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 GPR15P49685 360 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 RGS7P49802 495 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
UPF1-211ENST00000600868 HYAL1Q12794 435 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 SPA17Q15506 151 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 PTPN20Q4JDL3 420 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 TMEM184AQ6ZMB5 413 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 MON1BQ7L1V2 547 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms