RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 HOMER2Q9NSB8 354 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 AGTPBP1Q9UPW5 1226 aa16.8■□□□□ 0.28
SYDE1-204ENST00000600440 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 AVILO75366 819 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 VARSP26640 1264 aaKnown RBP16.79■□□□□ 0.28
SYDE1-204ENST00000600440 MLH1P40692 756 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 SIK1P57059 783 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 PPP4CP60510 307 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 RPL7AP62424 266 aaKnown RBP16.79■□□□□ 0.28
SYDE1-204ENST00000600440 TBL3Q12788 808 aaKnown RBP16.79■□□□□ 0.28
SYDE1-204ENST00000600440 HNRNPDQ14103 355 aaKnown RBP16.79■□□□□ 0.28
SYDE1-204ENST00000600440 TCEAL1Q15170 157 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 DLGAP5Q15398 846 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 MAP3K21Q5TCX8 1036 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 ANO5Q75V66 913 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 POLNQ7Z5Q5 900 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 FOXP3Q9BZS1 431 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 C20orf27Q9GZN8 174 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 ACSS3Q9H6R3 686 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 KCNK4Q9NYG8 393 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 STRIP2Q9ULQ0 834 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 IVNS1ABPQ9Y6Y0 642 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 SLC16A4O15374 487 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 CIITAP33076 1130 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 ALDH1A3P47895 512 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 ITGA9Q13797 1035 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
SYDE1-204ENST00000600440 CES4AQ5XG92 561 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 RNF148Q8N7C7 305 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 DCUN1D1Q96GG9 259 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
SYDE1-204ENST00000600440 POLR3CQ9BUI4 534 aaPredicted RBP16.79■□□□□ 0.28
SYDE1-204ENST00000600440 TBC1D12O60347 775 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 HSPA1LP34931 641 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 ELK3P41970 407 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 IGDCC3Q8IVU1 814 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 PDIK1LQ8N165 341 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 LZICQ8WZA0 190 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 ALKBH8Q96BT7 664 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 WDR83Q9BRX9 315 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 XPO7Q9UIA9 1087 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 RBM47A0AV96 593 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 TGDSO95455 350 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 GRM2Q14416 872 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 LPIN1Q14693 890 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 RIN3Q8TB24 985 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 RSAD2Q8WXG1 361 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 DDX1Q92499 740 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 DCUN1D5Q9BTE7 237 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 TUT1Q9H6E5 874 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 MAD1L1Q9Y6D9 718 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 TOGARAM1Q9Y4F4 1720 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 KBTBD13C9JR72 458 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 GRIN3BO60391 1043 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 VIL1P09327 827 aaKnown RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 ETV4P43268 484 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 NCCRP1Q6ZVX7 275 aaPredicted RBP16.78■□□□□ 0.28
SYDE1-204ENST00000600440 HELQQ8TDG4 1101 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 AP4B1Q9Y6B7 739 aa16.78■□□□□ 0.28
SYDE1-204ENST00000600440 PAPPAQ13219 1627 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 CYP3A7-CYP3A51PA0A087WV96 503 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 ARHGAP10A1A4S6 786 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 STRNO43815 780 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 SNHG28P0DPA3 235 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 ADRA2BP18089 450 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 CYP3A7P24462 503 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 DSG3P32926 999 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 COPAP53621 1224 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 EMP3P54852 163 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 PSMC5P62195 406 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 OASLQ15646 514 aaKnown RBP16.77■□□□□ 0.28
SYDE1-204ENST00000600440 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 LIN9Q5TKA1 542 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 SPOPLQ6IQ16 392 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 TRIML2Q8N7C3 387 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 AGR3Q8TD06 166 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 HSD17B14Q9BPX1 270 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 TRIM56Q9BRZ2 755 aaKnown RBP16.77■□□□□ 0.28
SYDE1-204ENST00000600440 LXNQ9BS40 222 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 NYXQ9GZU5 481 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 TUBGCP4Q9UGJ1 667 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 POMPQ9Y244 141 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 ADAMTSL3P82987 1691 aa16.77■□□□□ 0.28
SYDE1-204ENST00000600440 F8VP50 259 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.27
SYDE1-204ENST00000600440 TMEM63AO94886 807 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 WEE2P0C1S8 567 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 KRT39Q6A163 491 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 MZB1Q8WU39 189 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 CPT1BQ92523 772 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 TMIGD2Q96BF3 282 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 CCDC106Q9BWC9 280 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 CDH22Q9UJ99 828 aa16.77■□□□□ 0.27
SYDE1-204ENST00000600440 SHOC2Q9UQ13 582 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms