RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 CORO7P57737 925 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 ZNF200P98182 395 aaPredicted RBP22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 C15orf59Q2T9L4 293 aaPredicted RBP22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 CST9Q5W186 159 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 ALKAL1Q6UXT8 129 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 TTC30AQ86WT1 665 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 IGF2BP3O00425 579 aaKnown RBP eCLIP22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 TREHO43280 583 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 PECAM1P16284 738 aaPredicted RBP22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 GPD1P21695 349 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 ADAM17P78536 824 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 QPCTQ16769 361 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 BEST2Q8NFU1 509 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 CNPY3Q9BT09 278 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 CALN1Q9BXU9 219 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 FOXP3Q9BZS1 431 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 PCDH9Q9HC56 1237 aa22.69■■□□□ 1.22
GRAMD1A-212ENST00000600231 GDF10P55107 478 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 PKDCCQ504Y2 493 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 CYP4F22Q6NT55 531 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 ARHGEF2Q92974 986 aaKnown RBP22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 DNAH12Q6ZR08 3092 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 PCK1P35558 622 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 CDO1Q16878 200 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 TAOK1Q7L7X3 1001 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 C10orf67Q8IYJ2 551 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 TTC13Q8NBP0 860 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 ATXN2LQ8WWM7 1075 aaKnown RBP22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 LPIN3Q9BQK8 851 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 SAYSD1Q9NPB0 183 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 CNTN3Q9P232 1028 aa22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 PIN4Q9Y237 131 aaKnown RBP22.68■■□□□ 1.22
GRAMD1A-212ENST00000600231 FOXO6A8MYZ6 492 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 CREB1P16220 341 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 BEX3Q00994 111 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 SNX17Q15036 470 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 STILQ15468 1287 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 RNASEH2BQ5TBB1 312 aaKnown RBP22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 C9orf57Q5W0N0 161 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 CYP4V2Q6ZWL3 525 aaPredicted RBP22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 RFX6Q8HWS3 928 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 LRRC52Q8N7C0 313 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 OR6B3Q8NGW1 331 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 KLK14Q9P0G3 267 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 HCRTO43612 131 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 TCEA3O75764 348 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 PSEN2P49810 448 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 HUNKP57058 714 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 MMRN1Q13201 1228 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 MORF4L2Q15014 288 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 SOWAHAQ2M3V2 549 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 HP1BP3Q5SSJ5 553 aaPredicted RBP22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 MIS12Q9H081 205 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 INTS9Q9NV88 658 aaKnown RBP22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 RALGAPA2Q2PPJ7 1873 aa22.67■■□□□ 1.22
GRAMD1A-212ENST00000600231 FASTKD3Q14CZ7 662 aaKnown RBP22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 PCBP1Q15365 356 aaKnown RBP eCLIP22.66■■□□□ 1.228e-7■■□□□ 13.1
GRAMD1A-212ENST00000600231 SCUBE3Q8IX30 993 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 CFAP57Q96MR6 1250 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 HAS3O00219 553 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 CYP2B6P20813 491 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 ATP11AP98196 1134 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 CYP4X1Q8N118 509 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 SLC35F5Q8WV83 523 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 DPEP3Q9H4B8 488 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.66■■□□□ 1.223e-8■□□□□ 10.9
GRAMD1A-212ENST00000600231 TBK1Q9UHD2 729 aa22.66■■□□□ 1.22
GRAMD1A-212ENST00000600231 GABBR2O75899 941 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 MYL3P08590 195 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 CDH6P55285 790 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 CCDC14Q49A88 953 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 OLFML1Q6UWY5 402 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 UBQLN1Q9UMX0 589 aaKnown RBP22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 SMIM28A0A1B0GU29 152 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 APOC4-APOC2K7ER74 178 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 ENDOD1O94919 500 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 APOC2P02655 101 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 TAF1CQ15572 869 aaPredicted RBP22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 CEP128Q6ZU80 1094 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 C7orf31Q8N865 590 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 KHSRPQ92945 711 aaKnown RBP eCLIP22.65■■□□□ 1.223e-6■■□□□ 12.5
GRAMD1A-212ENST00000600231 CHMP6Q96FZ7 201 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 SLC4A5Q9BY07 1137 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 B3GNT5Q9BYG0 378 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 FRMD8P1Q9BZ68 369 aaPredicted RBP22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 RSAD1Q9HA92 442 aa22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 DDX20Q9UHI6 824 aaKnown RBP22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.65■■□□□ 1.22
GRAMD1A-212ENST00000600231 A8MXQ7 604 aa22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 IRF5Q13568 498 aa22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 TMEM110Q86TL2 294 aa22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 UNC45BQ8IWX7 931 aa22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 RSAD2Q8WXG1 361 aa22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 PRCCQ92733 491 aaPredicted RBP22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 ZNF317Q96PQ6 595 aaPredicted RBP22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 PRMT1Q99873 361 aaKnown RBP22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 HESX1Q9UBX0 185 aa22.64■■□□□ 1.22
GRAMD1A-212ENST00000600231 SHOC2Q9UQ13 582 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms