RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 NAP1L5Q96NT1 182 aaPredicted RBP21.3■■□□□ 1
IRF3-221ENST00000598808 UHRF1Q96T88 793 aaPredicted RBP21.3■■□□□ 1
IRF3-221ENST00000598808 KCNF1Q9H3M0 494 aa21.3■■□□□ 1
IRF3-221ENST00000598808 SLITRK6Q9H5Y7 841 aa21.3■■□□□ 1
IRF3-221ENST00000598808 AJAP1Q9UKB5 411 aaPredicted RBP21.3■■□□□ 1
IRF3-221ENST00000598808 FHOD1Q9Y613 1164 aa21.3■■□□□ 1
IRF3-221ENST00000598808 MYH10P35580 1976 aa21.29■■□□□ 1
IRF3-221ENST00000598808 CSH1P0DML2 217 aa21.29■■□□□ 1
IRF3-221ENST00000598808 CSH2P0DML3 217 aa21.29■■□□□ 1
IRF3-221ENST00000598808 GJA1P17302 382 aa21.29■■□□□ 1
IRF3-221ENST00000598808 BRD2P25440 801 aaKnown RBP21.29■■□□□ 1
IRF3-221ENST00000598808 SLC5A9Q2M3M2 681 aa21.29■■□□□ 1
IRF3-221ENST00000598808 KLHDC7AQ5VTJ3 777 aa21.29■■□□□ 1
IRF3-221ENST00000598808 SPECC1LQ69YQ0 1117 aa21.29■■□□□ 1
IRF3-221ENST00000598808 OTOP3Q7RTS5 596 aa21.29■■□□□ 1
IRF3-221ENST00000598808 APTXQ7Z2E3 356 aaKnown RBP21.29■■□□□ 1
IRF3-221ENST00000598808 ADHFE1Q8IWW8 467 aa21.29■■□□□ 1
IRF3-221ENST00000598808 CCDC112Q8NEF3 446 aa21.29■■□□□ 1
IRF3-221ENST00000598808 HNRNPABQ99729 332 aaKnown RBP21.29■■□□□ 1
IRF3-221ENST00000598808 ZNF334Q9HCZ1 680 aaPredicted RBP21.29■■□□□ 1
IRF3-221ENST00000598808 HESX1Q9UBX0 185 aa21.29■■□□□ 1
IRF3-221ENST00000598808 PRKAG3Q9UGI9 489 aa21.29■■□□□ 1
IRF3-221ENST00000598808 DENND4AQ7Z401 1863 aa21.29■■□□□ 1
IRF3-221ENST00000598808 BDP1A6H8Y1 2624 aa21.28■■□□□ 1
IRF3-221ENST00000598808 A0A1W2PRU2 124 aa21.28■■□□□ 1
IRF3-221ENST00000598808 ZNF197O14709 1029 aa21.28■■□□□ 1
IRF3-221ENST00000598808 PAEPP09466 180 aa21.28■■□□□ 1
IRF3-221ENST00000598808 PNMA6AP0CW24 399 aaPredicted RBP21.28■■□□□ 1
IRF3-221ENST00000598808 VDRP11473 427 aa21.28■■□□□ 1
IRF3-221ENST00000598808 CEBPBP17676 345 aa21.28■■□□□ 1
IRF3-221ENST00000598808 GABRR2P28476 465 aa21.28■■□□□ 1
IRF3-221ENST00000598808 SLC8A3P57103 927 aa21.28■■□□□ 1
IRF3-221ENST00000598808 DENND5BQ6ZUT9 1274 aa21.28■■□□□ 1
IRF3-221ENST00000598808 PAQR9Q6ZVX9 377 aa21.28■■□□□ 1
IRF3-221ENST00000598808 LEMD2Q8NC56 503 aa21.28■■□□□ 1
IRF3-221ENST00000598808 KIAA1524Q8TCG1 905 aa21.28■■□□□ 1
IRF3-221ENST00000598808 TCEAL4Q96EI5 215 aa21.28■■□□□ 1
IRF3-221ENST00000598808 C8orf48Q96LL4 319 aa21.28■■□□□ 1
IRF3-221ENST00000598808 KCNK16Q96T55 309 aa21.28■■□□□ 1
IRF3-221ENST00000598808 ATXN3LQ9H3M9 355 aa21.28■■□□□ 1
IRF3-221ENST00000598808 RTN4Q9NQC3 1192 aaKnown RBP21.28■■□□□ 1
IRF3-221ENST00000598808 DOCK6Q96HP0 2047 aa21.28■■□□□ 1
IRF3-221ENST00000598808 C2CD4DB7Z1M9 353 aa21.27■■□□□ 1
IRF3-221ENST00000598808 RNF225M0QZC1 329 aaPredicted RBP21.27■■□□□ 1
IRF3-221ENST00000598808 TEX33O43247 280 aa21.27■■□□□ 1
IRF3-221ENST00000598808 PAPLNO95428 1278 aa21.27■■□□□ 1
IRF3-221ENST00000598808 UCHL3P15374 230 aa21.27■■□□□ 1
IRF3-221ENST00000598808 RFX1P22670 979 aa21.27■■□□□ 1
IRF3-221ENST00000598808 POLR2FP61218 127 aaKnown RBP21.27■■□□□ 1
IRF3-221ENST00000598808 ZP2Q05996 745 aa21.27■■□□□ 1
IRF3-221ENST00000598808 SMOQ99835 787 aa21.27■■□□□ 1
IRF3-221ENST00000598808 NLRC4Q9NPP4 1024 aa21.27■■□□□ 1
IRF3-221ENST00000598808 TMEM30AQ9NV96 361 aa21.27■■□□□ 1
IRF3-221ENST00000598808 TSPAN16Q9UKR8 245 aa21.27■■□□□ 1
IRF3-221ENST00000598808 ITIH6Q6UXX5 1313 aa21.27■■□□□ 1
IRF3-221ENST00000598808 THAP12O43422 761 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 NPR3P17342 541 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 GNA15P30679 374 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 CCR2P41597 374 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 DRAP1Q14919 205 aaPredicted RBP21.26■□□□□ 0.99
IRF3-221ENST00000598808 TMC8Q8IU68 726 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 GPIHBP1Q8IV16 184 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 SPATA17Q96L03 361 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 SPAG5Q96R06 1193 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 MYADMQ96S97 322 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 PLCB1Q9NQ66 1216 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 UXTQ9UBK9 157 aaPredicted RBP21.26■□□□□ 0.99
IRF3-221ENST00000598808 KIAA1257Q9ULG3 409 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 SIK3Q9Y2K2 1263 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 M0QYV0 167 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 BEST1O76090 585 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 NOL4O94818 638 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 FGF19O95750 216 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 CDC25CP30307 473 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 CYP4F8P98187 520 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 TBX2Q13207 712 aaPredicted RBP21.26■□□□□ 0.99
IRF3-221ENST00000598808 TRIM14Q14142 442 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 TEAD2Q15562 447 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 ARHGAP15Q53QZ3 475 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 ARHGAP17Q68EM7 881 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 CLEC20AQ6ZU45 233 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 SHKBP1Q8TBC3 707 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 SHC3Q92529 594 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 FGF13Q92913 245 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 MCRS1Q96EZ8 462 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 ZNF830Q96NB3 372 aaPredicted RBP21.26■□□□□ 0.99
IRF3-221ENST00000598808 DUSP16Q9BY84 665 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 GANQ9H2C0 597 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 SPTLC3Q9NUV7 552 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.26■□□□□ 0.996e-9■■■□□ 17.9
IRF3-221ENST00000598808 EHD2Q9NZN4 543 aa21.26■□□□□ 0.99
IRF3-221ENST00000598808 CYP26A1O43174 497 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 ABL1P00519 1130 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 ZNF132P52740 706 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 SLC5A3P53794 718 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 PRSS36Q5K4E3 855 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 CACNA2D4Q7Z3S7 1137 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 NPAS3Q8IXF0 933 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 NUP93Q8N1F7 819 aa21.25■□□□□ 0.99
IRF3-221ENST00000598808 ST13P5Q8NFI4 369 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms