RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CASP14P31944 242 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 ZBED6P86452 979 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 BST2Q10589 180 aaKnown RBP23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 TRIM14Q14142 442 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 ASIC2Q16515 512 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 TAF3Q5VWG9 929 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 GRASPQ7Z6J2 395 aaPredicted RBP23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 SMRP1Q8NCR6 262 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 ZMIZ2Q8NF64 920 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 PSMG2Q969U7 264 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 RIPOR3Q96MK2 946 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 HCFC1R1Q9NWW0 138 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 DNMT3BQ9UBC3 853 aaKnown RBP23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 CDH22Q9UJ99 828 aa23.39■■□□□ 1.33
CHMP2A-204ENST00000597848 GYPCP04921 128 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 MTHFRP42898 656 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 PDE4CQ08493 712 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 MTMR3Q13615 1198 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 LEXMQ3ZCV2 418 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 DENND1BQ6P3S1 775 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 DENND5BQ6ZUT9 1274 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 NOP9Q86U38 636 aaKnown RBP23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 HS6ST3Q8IZP7 471 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 SECISBP2LQ93073 1101 aaKnown RBP23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 CEP295NLQ96MC4 621 aa23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 NUCKS1Q9H1E3 243 aaKnown RBP23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 USP15Q9Y4E8 981 aaPredicted RBP23.38■■□□□ 1.33
CHMP2A-204ENST00000597848 PAPLNO95428 1278 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 ADCY5O95622 1261 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 SETSIPP0DME0 302 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 MYL4P12829 197 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 NTHL1P78549 312 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 TFF2Q03403 129 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 IFRD2Q12894 506 aaPredicted RBP23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 SMAD4Q13485 552 aaKnown RBP23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 CYP4A22Q5TCH4 519 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 DRC7Q8IY82 874 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 NUP93Q8N1F7 819 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 EPS8L1Q8TE68 723 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 ASAH2Q9NR71 780 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 THEGQ9P2T0 379 aa23.37■■□□□ 1.33
CHMP2A-204ENST00000597848 GRXCR2A6NFK2 248 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 RHOP08100 348 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 CFHP08603 1231 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 PABPC1LQ4VXU2 614 aaKnown RBP23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 PKDCCQ504Y2 493 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 PIGZQ86VD9 579 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 PASD1Q8IV76 773 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 SLC20A1Q8WUM9 679 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 UBXN6Q9BZV1 441 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 GRPEL1Q9HAV7 217 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 EHD2Q9NZN4 543 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 PCDHGC3Q9UN70 934 aa23.36■■□□□ 1.33
CHMP2A-204ENST00000597848 TULP2O00295 520 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 XPO1O14980 1071 aaKnown RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 MBTPS2O43462 519 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 RTN3O95197 1032 aaPredicted RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 HMGA1P17096 107 aaKnown RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 SLC5A3P53794 718 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 PDZD4Q76G19 769 aaPredicted RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 IRF2BP2Q7Z5L9 587 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 ZNF677Q86XU0 584 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 NECTIN4Q96NY8 510 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 ZNF334Q9HCZ1 680 aaPredicted RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 AIPL1Q9NZN9 384 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 NOCTQ9UK39 431 aaKnown RBP23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 CEP83Q9Y592 693 aa23.35■■□□□ 1.33
CHMP2A-204ENST00000597848 HHLA1C9JL84 531 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 TNFRSF10BO14763 440 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 MMEP08473 750 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 GPD2P43304 727 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 RGS7P49802 495 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 USP46P62068 366 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 CDR2Q01850 454 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 CBX2Q14781 532 aaPredicted RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 MEA1Q16626 185 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 AAK1Q2M2I8 961 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 PUS10Q3MIT2 529 aaKnown RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 PTCRAQ6ISU1 281 aaPredicted RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 LEMD2Q8NC56 503 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 SCAMP5Q8TAC9 235 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 SLC35F5Q8WV83 523 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 DDX1Q92499 740 aaKnown RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 LRRC4Q9HBW1 653 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 WDR6Q9NNW5 1121 aaKnown RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 PNPLA8Q9NP80 782 aa23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 UXTQ9UBK9 157 aaPredicted RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 MRPS23Q9Y3D9 190 aaKnown RBP23.34■■□□□ 1.33
CHMP2A-204ENST00000597848 BRWD1Q9NSI6 2320 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 ZNF197O14709 1029 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 FSHRP23945 695 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 YWHAQP27348 245 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 PLA2G4AP47712 749 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 KLHL30Q0D2K2 578 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 TSR1Q2NL82 804 aaKnown RBP23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 E4F1Q66K89 784 aaPredicted RBP23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 PMF1Q6P1K2 205 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 GPRIN1Q7Z2K8 1008 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 SUSD6Q92537 303 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms