RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ZNF806P0C7X5 589 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 PCSK1P29120 753 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 LIMK1P53667 647 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 DMC1Q14565 340 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 MDH1BQ5I0G3 518 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 DPH6Q7L8W6 267 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 CACNA2D4Q7Z3S7 1137 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 C12orf40Q86WS4 652 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 WDR49Q8IV35 697 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 CCDC65Q8IXS2 484 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 CPA6Q8N4T0 437 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 ZNF507Q8TCN5 953 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 ANKRD36BP1Q96IX9 119 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 LOXL4Q96JB6 756 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 SPATA17Q96L03 361 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 SLC8A2Q9UPR5 921 aa11.4□□□□□ -0.58
USE1-203ENST00000593597 ZNF840PA6NDX5 716 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 F8VP50 259 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 LEFTY2O00292 366 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CLDN5O00501 218 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CLIC2O15247 247 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 EIF3DO15371 548 aaKnown RBP eCLIP11.39□□□□□ -0.59
USE1-203ENST00000593597 STX6O43752 255 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 AKAP3O75969 853 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CYP17A1P05093 508 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CCDC192P0DO97 292 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 BCKDHBP21953 392 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 MPLP40238 635 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 IFNAR2P48551 515 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CASP4P49662 377 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CYP27A1Q02318 531 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CYP24A1Q07973 514 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 PSMD6Q15008 389 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 DUOXA2Q1HG44 320 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 AASDHQ4L235 1098 aaPredicted RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 CC2D1AQ6P1N0 951 aaPredicted RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 VSTM1Q6UX27 236 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 SYT13Q7L8C5 426 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 CAMKK1Q8N5S9 505 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 RDH13Q8NBN7 331 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 USP33Q8TEY7 942 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 ATP2A3Q93084 1043 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 DHX58Q96C10 678 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 INTS4Q96HW7 963 aaKnown RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 ZFRQ96KR1 1074 aaKnown RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 CGRRF1Q99675 332 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 ZNF518BQ9C0D4 1074 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 XYLT2Q9H1B5 865 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 TFIP11Q9UBB9 837 aaKnown RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 PI4KAP42356 2102 aa11.39□□□□□ -0.59
USE1-203ENST00000593597 ASCC3Q8N3C0 2202 aaKnown RBP11.39□□□□□ -0.59
USE1-203ENST00000593597 IGF2RP11717 2491 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 KIAA0391O15091 583 aaKnown RBP11.38□□□□□ -0.59
USE1-203ENST00000593597 SPTLC2O15270 562 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 ATG13O75143 517 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 TACC1O75410 805 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 OAS1P00973 400 aaKnown RBP11.38□□□□□ -0.59
USE1-203ENST00000593597 TNNC2P02585 160 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 HDCP19113 662 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 PMLP29590 882 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 SLC6A11P48066 632 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 CYP2J2P51589 502 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 SEC13P55735 322 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 NOP14P78316 857 aaKnown RBP11.38□□□□□ -0.59
USE1-203ENST00000593597 ASIC1P78348 528 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 SLC7A9P82251 487 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 MYO1EQ12965 1108 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 KCNB1Q14721 858 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 SNRNP35Q16560 246 aaKnown RBP11.38□□□□□ -0.59
USE1-203ENST00000593597 FBXO43Q4G163 708 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 FAM26FQ5R3K3 315 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 N4BP2L1Q5TBK1 243 aaPredicted RBP11.38□□□□□ -0.59
USE1-203ENST00000593597 STPG1Q5TH74 334 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 C4orf50Q6ZRC1 276 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 DENND5BQ6ZUT9 1274 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 PAQR9Q6ZVX9 377 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 FILIP1Q7Z7B0 1213 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 RASSF3Q86WH2 238 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 NELFCDQ8IXH7 590 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 WBP2Q969T9 261 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 B3GNT5Q9BYG0 378 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 TPSD1Q9BZJ3 242 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 SDCBP2Q9H190 292 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 SMYD3Q9H7B4 428 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 EBF1Q9UH73 591 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 CPQQ9Y646 472 aa11.38□□□□□ -0.59
USE1-203ENST00000593597 PCDH15Q96QU1 1955 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 PPP6R2O75170 966 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 APBB3O95704 486 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 DLATP10515 647 aaKnown RBP11.37□□□□□ -0.59
USE1-203ENST00000593597 GRIK1P39086 918 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 PGFP49763 221 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms