RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 HOXC13P31276 330 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 IFNAR2P48551 515 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 SRSF5Q13243 272 aaKnown RBP17.14■□□□□ 0.33
CIRBP-240ENST00000592815 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-240ENST00000592815 ZNF77Q15935 545 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 TDRD10Q5VZ19 366 aaKnown RBP17.14■□□□□ 0.33
CIRBP-240ENST00000592815 LONP2Q86WA8 852 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 CPA6Q8N4T0 437 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 OSCP1Q8WVF1 389 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 C8orf48Q96LL4 319 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 LINC00597Q9H2U6 94 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 ECT2Q9H8V3 914 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 EHD2Q9NZN4 543 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 ZDHHC9Q9Y397 364 aa17.14■□□□□ 0.33
CIRBP-240ENST00000592815 CLDN5O00501 218 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 ABL1P00519 1130 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 EGFP01133 1207 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 C4BPAP04003 597 aaKnown RBP17.13■□□□□ 0.33
CIRBP-240ENST00000592815 GJA4P35212 333 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 PDE6CP51160 858 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 AP3M2P53677 418 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 CACNA2D1P54289 1103 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 CDH8P55286 799 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 CLDN10P78369 228 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 NCOA4Q13772 614 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 NAIF1Q69YI7 327 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-240ENST00000592815 PKN3Q6P5Z2 889 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 SLC9A9Q8IVB4 645 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 B3GALNT2Q8NCR0 500 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 ELMO3Q96BJ8 720 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 P2RY13Q9BPV8 354 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 TTLL2Q9BWV7 592 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 B3GNT5Q9BYG0 378 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 KCTD10Q9H3F6 313 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 SMYD3Q9H7B4 428 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 HPSEQ9Y251 543 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 DMXL1Q9Y485 3027 aa17.13■□□□□ 0.33
CIRBP-240ENST00000592815 ZNF840PA6NDX5 716 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 PDXKO00764 312 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 ATG13O75143 517 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 NR3C1P04150 777 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 RPN1P04843 607 aaKnown RBP17.12■□□□□ 0.33
CIRBP-240ENST00000592815 DRD1P21728 446 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 TGM1P22735 817 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 HOXA6P31267 233 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 CNR2P34972 360 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 PPP3CCP48454 512 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 NOP14P78316 857 aaKnown RBP17.12■□□□□ 0.33
CIRBP-240ENST00000592815 DLG4P78352 724 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 KRT85P78386 507 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 TAF10Q12962 218 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 USP4Q13107 963 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 PUM1Q14671 1186 aaKnown RBP eCLIP17.12■□□□□ 0.33
CIRBP-240ENST00000592815 RSPO4Q2I0M5 234 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-240ENST00000592815 ZNF699Q32M78 642 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 EML3Q32P44 896 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 ZNF667Q5HYK9 610 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 LAIR1Q6GTX8 287 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 DGLUCYQ7Z3D6 616 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 ATP2A3Q93084 1043 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 EXOC4Q96A65 974 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 TMEM30AQ9NV96 361 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 USP18Q9UMW8 372 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 ARHGAP26Q9UNA1 814 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 CEP250Q9BV73 2442 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 DCHS1Q96JQ0 3298 aa17.12■□□□□ 0.33
CIRBP-240ENST00000592815 VNN1O95497 513 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 MYL1P05976 194 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 PFKLP17858 780 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 SYKP43405 635 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-240ENST00000592815 NDUFA8P51970 172 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 ZXDBP98169 803 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-240ENST00000592815 NR1H3Q13133 447 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 CEP68Q76N32 757 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 TMEM174Q8WUU8 243 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 RNF38Q9H0F5 515 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 PARD6AQ9NPB6 346 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
CIRBP-240ENST00000592815 LEFTY2O00292 366 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 RNF40O75150 1001 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 RETP07949 1114 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 TCF3P15923 654 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 SPEM2Q0P670 501 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 SGSM1Q2NKQ1 1148 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 WDR5BQ86VZ2 330 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 TMC2Q8TDI7 906 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 CD101Q93033 1021 aa17.1■□□□□ 0.33
CIRBP-240ENST00000592815 SLITRK1Q96PX8 696 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms