RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
VMP1-214ENST00000592106 TFIP11Q9UBB9 837 aaKnown RBP10.83□□□□□ -0.68
VMP1-214ENST00000592106 MED19A0JLT2 244 aaPredicted RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 ARHGAP33O14559 1287 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 RNF40O75150 1001 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 PHACTR2O75167 634 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 AKAP3O75969 853 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 ARSAP15289 507 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 TCF3P15923 654 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 TRIM21P19474 475 aaKnown RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 BDNFP23560 247 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 ATICP31939 592 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 ME1P48163 572 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 ATXN1P54253 815 aaKnown RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 CYP24A1Q07973 514 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 DMWDQ09019 674 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 CSRP2Q16527 193 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 MDH1BQ5I0G3 518 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 WDR44Q5JSH3 913 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 ATL3Q6DD88 541 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 FSTL4Q6MZW2 842 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 PRR23CQ6ZRP0 262 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 EPM2AIP1Q7L775 607 aaPredicted RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 CACNA2D4Q7Z3S7 1137 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 DDX42Q86XP3 938 aaKnown RBP eCLIP10.82□□□□□ -0.68
VMP1-214ENST00000592106 NELFCDQ8IXH7 590 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 CAMKK1Q8N5S9 505 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 C12orf50Q8NA57 414 aaPredicted RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 RDH13Q8NBN7 331 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 GLIS3Q8NEA6 775 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 SH3RF2Q8TEC5 729 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 KBTBD7Q8WVZ9 684 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 GAB3Q8WWW8 586 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 HPS3Q969F9 1004 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 SNX21Q969T3 373 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 SYAP1Q96A49 352 aaPredicted RBP10.82□□□□□ -0.68
VMP1-214ENST00000592106 LOXL4Q96JB6 756 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 SLITRK1Q96PX8 696 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 ELOVL4Q9GZR5 314 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 PARD6AQ9NPB6 346 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 CFAP45Q9UL16 551 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 ARHGAP26Q9UNA1 814 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
VMP1-214ENST00000592106 MYO15AQ9UKN7 3530 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 PVALEFA0A1B0GWK0 134 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 SLC9A3R1O14745 358 aaPredicted RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 CLIC2O15247 247 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 POLR2DO15514 142 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 HRO43593 1189 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 HCRTO43612 131 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 TACC1O75410 805 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 RPP40O75818 363 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 STAU1O95793 577 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 F13A1P00488 732 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 EGFP01133 1207 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 PDGFRBP09619 1106 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 ZSCAN22P10073 491 aaPredicted RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 HDCP19113 662 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 GJA4P35212 333 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 GNL1P36915 607 aaPredicted RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 AP3M2P53677 418 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 PSMD2Q13200 908 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 SRSF5Q13243 272 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 AASDHQ4L235 1098 aaPredicted RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 TDRD10Q5VZ19 366 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 SHC4Q6S5L8 630 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 LIMS2Q7Z4I7 341 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 C12orf56Q8IXR9 622 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 KIAA1958Q8N8K9 716 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 ARL14EPQ8N8R7 260 aaPredicted RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 PDZD8Q8NEN9 1154 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 MYCBPAPQ8TBZ2 947 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 DDX1Q92499 740 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 CCDC127Q96BQ5 260 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 PCED1BQ96HM7 432 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 FAM84AQ96KN4 292 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 CRTAC1Q9NQ79 661 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 EXOC1Q9NV70 894 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 WNT6Q9Y6F9 365 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
VMP1-214ENST00000592106 OTOGLQ3ZCN5 2332 aa10.81□□□□□ -0.68
VMP1-214ENST00000592106 GVINP1Q7Z2Y8 2422 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 A8MXQ7 604 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 SLC30A4O14863 429 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 AXIN1O15169 862 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 EXOC3O60645 756 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 ATP2C2O75185 946 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 EPN2O95208 641 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 APBB3O95704 486 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 P4HA1P13674 534 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 TGM1P22735 817 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 LMO2P25791 158 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 NOP14P78316 857 aaKnown RBP10.8□□□□□ -0.68
VMP1-214ENST00000592106 BIRC3Q13489 604 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 ELF2Q15723 593 aa10.8□□□□□ -0.68
VMP1-214ENST00000592106 CCDC142Q17RM4 750 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms