RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NSL1Q96IY1 281 aa19.44■□□□□ 0.7
DDX39A-206ENST00000587730 MTMR12Q9C0I1 747 aa19.44■□□□□ 0.7
DDX39A-206ENST00000587730 ASNSD1Q9NWL6 643 aa19.44■□□□□ 0.7
DDX39A-206ENST00000587730 HOXC10Q9NYD6 342 aa19.44■□□□□ 0.7
DDX39A-206ENST00000587730 BRCA1P38398 1863 aaKnown RBP19.43■□□□□ 0.7
DDX39A-206ENST00000587730 CFAP69A5D8W1 941 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 B4GALT4O60513 344 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 CST3P01034 146 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-206ENST00000587730 CALRP27797 417 aaKnown RBP19.43■□□□□ 0.7
DDX39A-206ENST00000587730 EPHB2P29323 1055 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 RFC1P35251 1148 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-206ENST00000587730 PSMC1P62191 440 aaKnown RBP19.43■□□□□ 0.7
DDX39A-206ENST00000587730 CDK16Q00536 496 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 BBS9Q3SYG4 887 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 RFX6Q8HWS3 928 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 ZNF180Q9UJW8 692 aa19.43■□□□□ 0.7
DDX39A-206ENST00000587730 CPSF3Q9UKF6 684 aaKnown RBP19.43■□□□□ 0.7
DDX39A-206ENST00000587730 GOLGA8SH3BPF8 625 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 GOLGA8MH3BSY2 632 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 IL18RAPO95256 599 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 CBX6O95503 412 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 NEK3P51956 506 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 ROR1Q01973 937 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 DPYSL3Q14195 570 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 ANKRD22Q5VYY1 191 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 RAB3IL1Q8TBN0 382 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 SYNCQ9H7C4 482 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 ZWILCHQ9H900 591 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 ZNF112Q9UJU3 913 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 COL4A5P29400 1685 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 PARP14Q460N5 1801 aa19.42■□□□□ 0.7
DDX39A-206ENST00000587730 MSCO60682 206 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 HARSP12081 509 aaKnown RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 ASPAP45381 313 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 ZBTB16Q05516 673 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 PTK7Q13308 1070 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 TMEM132BQ14DG7 1078 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 PTPN20Q4JDL3 420 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 CYP4A22Q5TCH4 519 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 C4orf50Q6ZRC1 276 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 TTC39CQ8N584 583 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 SLC4A11Q8NBS3 891 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 TFAP2BQ92481 460 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 PTCD3Q96EY7 689 aaKnown RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 ACO2Q99798 780 aaKnown RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 IQCGQ9H095 443 aaKnown RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 TRDMT1O14717 391 aaKnown RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 KRT37O76014 449 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 RBP3P10745 1247 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 GABRB2P47870 512 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 DYNLT1P63172 113 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 IRX1P78414 480 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 DGKZQ13574 1117 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 PRKD1Q15139 912 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 MSS51Q4VC12 460 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 DENND1BQ6P3S1 775 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 MICAL1Q8TDZ2 1067 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 SKA1Q96BD8 255 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 LRRC39Q96DD0 335 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 MRRFQ96E11 262 aaKnown RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 WNK4Q96J92 1243 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 DENND2DQ9H6A0 471 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 MKS1Q9NXB0 559 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 ZFATQ9P243 1243 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 PAK5Q9P286 719 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 HEY2Q9UBP5 337 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 NKX1-2Q9UD57 310 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-206ENST00000587730 PHIPQ8WWQ0 1821 aa19.41■□□□□ 0.7
DDX39A-206ENST00000587730 DOCK1Q14185 1865 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 A8MXQ7 604 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 GYG2O15488 501 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 TGFB3P10600 412 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 NEFHP12036 1026 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 CD19P15391 556 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 ETV4P43268 484 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 STAT5BP51692 787 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 GDF10P55107 478 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 BASP1P80723 227 aaKnown RBP19.4■□□□□ 0.7
DDX39A-206ENST00000587730 TBCCQ15814 346 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 TTC39BQ5VTQ0 682 aaPredicted RBP19.4■□□□□ 0.7
DDX39A-206ENST00000587730 APBB1IPQ7Z5R6 666 aaPredicted RBP19.4■□□□□ 0.7
DDX39A-206ENST00000587730 SLC26A11Q86WA9 606 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 MAP7D3Q8IWC1 876 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 MCUR1Q96AQ8 359 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 MTBPQ96DY7 904 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 BCO2Q9BYV7 579 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 XYLT2Q9H1B5 865 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 CYP3A43Q9HB55 503 aa19.4■□□□□ 0.7
DDX39A-206ENST00000587730 I3L4J1 428 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 TOMM70O94826 608 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 TMEM63AO94886 807 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 PRKCBP05771 671 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 P4HA1P13674 534 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 PTPRAP18433 802 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 VHLP40337 213 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 PTDSS1P48651 473 aaKnown RBP19.39■□□□□ 0.7
DDX39A-206ENST00000587730 TFAMQ00059 246 aaKnown RBP19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms