RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ADSSL1	Q8N142	457 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SYNPO	Q8N3V7	929 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	USP13	Q92995	863 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	EXOC4	Q96A65	974 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	LRRC3B	Q96PB8	259 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SLITRK1	Q96PX8	696 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FAM83C	Q9BQN1	747 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	B3GNT5	Q9BYG0	378 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CHRD	Q9H2X0	955 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	MTF2	Q9Y483	593 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NME7	Q9Y5B8	376 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	RIF1	Q5UIP0	2472 aa	Known RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SPECC1L-ADORA2A	F8WAN1	911 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CLSTN1	O94985	981 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CKM	P06732	381 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CD72	P21854	359 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ASPA	P45381	313 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	GCLM	P48507	274 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CDR1	P51861	262 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CDH8	P55286	799 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PPP3CA	Q08209	521 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CCDC142	Q17RM4	750 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	DGKK	Q5KSL6	1271 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NUP93	Q8N1F7	819 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SMARCD1	Q96GM5	515 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NIF3L1	Q9GZT8	377 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	DPEP3	Q9H4B8	488 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	IL37	Q9NZH6	218 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	GCNT4	Q9P109	453 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ARHGAP26	Q9UNA1	814 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ZNF292	O60281	2723 aa		13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ZNF638	Q14966	1978 aa	Known RBP	13.38	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CACNA1I	Q9P0X4	2223 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PATJ	Q8NI35	1801 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ZNF840P	A6NDX5	716 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SP9	P0CG40	484 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	HDC	P19113	662 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CCNE1	P24864	410 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CTH	P32929	405 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	MXI1	P50539	228 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NDST1	P52848	882 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NRL	P54845	237 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	RUNX3	Q13761	415 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SNX30	Q5VWJ9	437 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FAM35A	Q86V20	835 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FBXL13	Q8NEE6	735 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TAS1R2	Q8TE23	839 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NKD2	Q969F2	451 aa	Predicted RBP	13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PHOX2B	Q99453	314 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ZNF518B	Q9C0D4	1074 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SDCBP2	Q9H190	292 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	METTL14	Q9HCE5	456 aa	Known RBP	13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CSNK1G1	Q9HCP0	422 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PNPLA8	Q9NP80	782 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PRMT8	Q9NR22	394 aa	Predicted RBP	13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	GKN1	Q9NS71	199 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FAM86C1	Q9NVL1	165 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	VPS13A	Q96RL7	3174 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ANAPC1	Q9H1A4	1944 aa		13.37	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FAM92A	A1XBS5	289 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PMM2	O15305	246 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	GFRA3	O60609	400 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	LRRN2	O75325	713 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	OLFM2	O95897	454 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TRIM49	P0CI25	452 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TRIM49C	P0CI26	452 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CHRNB1	P11230	501 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	YWHAQ	P27348	245 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TUB	P50607	506 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CCR3	P51677	355 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SLC7A9	P82251	487 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	USP4	Q13107	963 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	MTF1	Q14872	753 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ZNF77	Q15935	545 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	WDR44	Q5JSH3	913 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ANKRD40	Q6AI12	368 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SCARA5	Q6ZMJ2	495 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PAQR9	Q6ZVX9	377 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FRMD5	Q7Z6J6	570 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ACOT1	Q86TX2	421 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	1e-11	■□□□□ 8.7
CDK5RAP3-222	ENST00000581708	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FUK	Q8N0W3	1084 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	STKLD1	Q8NE28	680 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	OSCP1	Q8WVF1	389 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NELL1	Q92832	810 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ATP2A3	Q93084	1043 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	CEP63	Q96MT8	703 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	HNRNPAB	Q99729	332 aa	Known RBP	13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	DUSP9	Q99956	384 aa	Known RBP	13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	MED10	Q9BTT4	135 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	NT5C1A	Q9BXI3	368 aa		13.36	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FBXO44	Q9H4M3	255 aa		13.36	□□□□□ -0.27

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