RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 PRKD2Q9BZL6 878 aa21.8■■□□□ 1.08
SNX11-209ENST00000581705 SMYD3Q9H7B4 428 aa21.8■■□□□ 1.08
SNX11-209ENST00000581705 SNX9Q9Y5X1 595 aa21.8■■□□□ 1.08
SNX11-209ENST00000581705 CLUHO75153 1309 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 ZMYND10O75800 440 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 PDGFBP01127 241 aaPredicted RBP21.79■■□□□ 1.08
SNX11-209ENST00000581705 FGFR3P22607 806 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 MAGEA1P43355 309 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 AARSP49588 968 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNX11-209ENST00000581705 VCPP55072 806 aaKnown RBP21.79■■□□□ 1.08
SNX11-209ENST00000581705 CD300LGQ6UXG3 332 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 SCARA5Q6ZMJ2 495 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 PRSS33Q8NF86 280 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 MMS19Q96T76 1030 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 TRMT1Q9NXH9 659 aaKnown RBP21.79■■□□□ 1.08
SNX11-209ENST00000581705 FBXW11Q9UKB1 542 aa21.79■■□□□ 1.08
SNX11-209ENST00000581705 ADAM12O43184 909 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 KRT86O43790 486 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 HUS1O60921 280 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 CD58P19256 250 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 AVPR2P30518 371 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 GNA15P30679 374 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 KIF5AQ12840 1032 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 TDGQ13569 410 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 ARHGAP29Q52LW3 1261 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 SDCBP2Q9H190 292 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 KCNK12Q9HB15 430 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 PIDD1Q9HB75 910 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 GOLGA2P5Q9HBQ8 144 aa21.78■■□□□ 1.08
SNX11-209ENST00000581705 KMT2EQ8IZD2 1858 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 USP27XA6NNY8 438 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 MED7O43513 233 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 CHRNB2P17787 502 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 FMO1Q01740 532 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 CYP27A1Q02318 531 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 CCDC122Q5T0U0 273 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 GPIHBP1Q8IV16 184 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 TMEM86AQ8N2M4 240 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 C17orf53Q8N3J3 647 aaPredicted RBP21.77■■□□□ 1.08
SNX11-209ENST00000581705 C3orf58Q8NDZ4 430 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 APPL2Q8NEU8 664 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 SLC20A1Q8WUM9 679 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 NT5C1AQ9BXI3 368 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 IGSF9Q9P2J2 1179 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 EPS15L1Q9UBC2 864 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 MYO1AQ9UBC5 1043 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 VWA8A3KMH1 1905 aa21.77■■□□□ 1.08
SNX11-209ENST00000581705 BTNL10A8MVZ5 291 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 TRAPPC3O43617 180 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 WARSP23381 471 aaKnown RBP21.76■■□□□ 1.07
SNX11-209ENST00000581705 GBP2P32456 591 aaPredicted RBP21.76■■□□□ 1.07
SNX11-209ENST00000581705 RAD23BP54727 409 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 STILQ15468 1287 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 SOWAHAQ2M3V2 549 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 NYAP1Q6ZVC0 841 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 TMEM176AQ96HP8 235 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 MYADMQ96S97 322 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 MTRRQ9UBK8 725 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 PCDHGC3Q9UN70 934 aa21.76■■□□□ 1.07
SNX11-209ENST00000581705 CACNA1HO95180 2353 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 SPTLC1O15269 473 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 LSM8O95777 96 aaKnown RBP21.75■■□□□ 1.07
SNX11-209ENST00000581705 HNRNPA1P09651 372 aaKnown RBP eCLIP21.75■■□□□ 1.07
SNX11-209ENST00000581705 H2AFZP0C0S5 128 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 ARHGAP25P42331 645 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 PTPN5P54829 565 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 RAB33AQ14088 237 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 LIN9Q5TKA1 542 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 H2AFVQ71UI9 128 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 TMEM130Q8N3G9 435 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 WHAMMQ8TF30 809 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 ZNF606Q8WXB4 792 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 ISCUQ9H1K1 167 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.75■■□□□ 1.07
SNX11-209ENST00000581705 DSEQ9UL01 958 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 BACE2Q9Y5Z0 518 aa21.75■■□□□ 1.07
SNX11-209ENST00000581705 THAP12O43422 761 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 RTN2O75298 545 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 MMEP08473 750 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 VDRP11473 427 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 HOXA9P31269 272 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 OR1D2P34982 312 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 RAP1GAPP47736 663 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 CDH8P55286 799 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 TCF15Q12870 199 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 SLC4A11Q8NBS3 891 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 CALR3Q96L12 384 aaKnown RBP21.74■■□□□ 1.07
SNX11-209ENST00000581705 ZNF518BQ9C0D4 1074 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 SEPT11Q9NVA2 429 aaKnown RBP21.74■■□□□ 1.07
SNX11-209ENST00000581705 DUSP12Q9UNI6 340 aa21.74■■□□□ 1.07
SNX11-209ENST00000581705 I3L4J1 428 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 CYP1A1P04798 512 aaPredicted RBP21.73■■□□□ 1.07
SNX11-209ENST00000581705 C8AP07357 584 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 TKTP29401 623 aaKnown RBP21.73■■□□□ 1.07
SNX11-209ENST00000581705 BRCC3P46736 316 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 NDST1P52848 882 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 NUBP1P53384 320 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 CLEC16AQ2KHT3 1053 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 PPM1LQ5SGD2 360 aa21.73■■□□□ 1.07
SNX11-209ENST00000581705 RSPO2Q6UXX9 243 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms