RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 USP39Q53GS9 565 aaKnown RBP22.44■■□□□ 1.18
TSEN54-205ENST00000578415 ANO7Q6IWH7 933 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 CCDC26Q8TAB7 109 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 ANKRD36BP1Q96IX9 119 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 CNOT6LQ96LI5 555 aaKnown RBP22.44■■□□□ 1.18
TSEN54-205ENST00000578415 TTLL2Q9BWV7 592 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 MYO16Q9Y6X6 1858 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 FRYQ5TBA9 3013 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 ANAPC1Q9H1A4 1944 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 A0A087X0B3 334 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 CYP17A1P05093 508 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 CHRM1P11229 460 aaPredicted RBP22.43■■□□□ 1.18
TSEN54-205ENST00000578415 PFKLP17858 780 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 GRIK1P39086 918 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 TXLNAP40222 546 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 PDE6CP51160 858 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 FAM173BQ6P4H8 233 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 DENND5BQ6ZUT9 1274 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 C11orf74Q86VG3 221 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 SFTPA1Q8IWL2 248 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 MDGA1Q8NFP4 955 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 CEP295NLQ96MC4 621 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 PANK4Q9NVE7 773 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 MMP17Q9ULZ9 603 aa22.43■■□□□ 1.18
TSEN54-205ENST00000578415 ZNF840PA6NDX5 716 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 PDGFRBP09619 1106 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 HNRNPLP14866 589 aaKnown RBP eCLIP22.42■■□□□ 1.18
TSEN54-205ENST00000578415 WARSP23381 471 aaKnown RBP22.42■■□□□ 1.18
TSEN54-205ENST00000578415 MESP2Q0VG99 397 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 CBWD2Q8IUF1 395 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 CCDC33Q8N5R6 958 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 GLIS3Q8NEA6 775 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 PCED1BQ96HM7 432 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 PANK2Q9BZ23 570 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 RNF38Q9H0F5 515 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 TRPM5Q9NZQ8 1165 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 NME7Q9Y5B8 376 aa22.42■■□□□ 1.18
TSEN54-205ENST00000578415 PATE3B3GLJ2 98 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 OLFM2O95897 454 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 TNNC2P02585 160 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 PROS1P07225 676 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 STAT6P42226 847 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 SLC7A9P82251 487 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 CYP27A1Q02318 531 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 RESTQ13127 1097 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 MAPRE1Q15691 268 aaKnown RBP22.41■■□□□ 1.18
TSEN54-205ENST00000578415 CRY1Q16526 586 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 DAB2IPQ5VWQ8 1189 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 TMEM92Q6UXU6 159 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 CCDC73Q6ZRK6 1079 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 FILIP1Q7Z7B0 1213 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 ADGRG2Q8IZP9 1017 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 ABCA7Q8IZY2 2146 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 WASF3Q9UPY6 502 aa22.41■■□□□ 1.18
TSEN54-205ENST00000578415 R3HCC1Q9Y3T6 440 aaKnown RBP22.41■■□□□ 1.18
TSEN54-205ENST00000578415 ZNF233A6NK53 670 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 F8VP50 259 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 CDX4O14627 284 aaPredicted RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 SCAMP3O14828 347 aaKnown RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 KHNYNO15037 678 aaKnown RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 KIAA0391O15091 583 aaKnown RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 NOP14P78316 857 aaKnown RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 CEBPZQ03701 1054 aaKnown RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 ZNF252P-AS1Q0IIN9 211 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 DUOXA2Q1HG44 320 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 SH3PXD2AQ5TCZ1 1133 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 CYP2U1Q7Z449 544 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 KIAA1958Q8N8K9 716 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 OLIG1Q8TAK6 271 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 MYCBPAPQ8TBZ2 947 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 MRPL45Q9BRJ2 306 aaKnown RBP22.4■■□□□ 1.18
TSEN54-205ENST00000578415 TMEM9BQ9NQ34 198 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 TMEM30AQ9NV96 361 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 SMPD4Q9NXE4 827 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 CPQQ9Y646 472 aa22.4■■□□□ 1.18
TSEN54-205ENST00000578415 TRIM66O15016 1216 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 OAS1P00973 400 aaKnown RBP22.39■■□□□ 1.17
TSEN54-205ENST00000578415 ANXA13P27216 316 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 HOXD13P35453 343 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 SLC6A11P48066 632 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 MRPS21P82921 87 aaKnown RBP22.39■■□□□ 1.17
TSEN54-205ENST00000578415 CUL4AQ13619 759 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 DHCR24Q15392 516 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 SURF1Q15526 300 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 MDH1BQ5I0G3 518 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 C12orf40Q86WS4 652 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 HPS3Q969F9 1004 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 C8orf48Q96LL4 319 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 MMS19Q96T76 1030 aa22.39■■□□□ 1.17
TSEN54-205ENST00000578415 RALYQ9UKM9 306 aaKnown RBP22.39■■□□□ 1.17
TSEN54-205ENST00000578415 HELZP42694 1942 aaKnown RBP22.38■■□□□ 1.17
TSEN54-205ENST00000578415 C1QTNF9BB2RNN3 333 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 C1QTNF9P0C862 333 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 CACNA2D1P54289 1103 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 IRX4P78413 519 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 TRAPPC11Q7Z392 1133 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 WDR49Q8IV35 697 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 ALLCQ8N6M5 410 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 IL17RCQ8NAC3 791 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 HSPBP1Q9NZL4 362 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms