RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ACDQ96AP0 544 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 CHAMP1Q96JM3 812 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 MMS19Q96T76 1030 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 MRPL45Q9BRJ2 306 aaKnown RBP16.59■□□□□ 0.25
NME3-211ENST00000568561 SMPD4Q9NXE4 827 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 CDH9Q9ULB4 789 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 ARHGAP26Q9UNA1 814 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 FRYQ5TBA9 3013 aa16.59■□□□□ 0.25
NME3-211ENST00000568561 ZNF233A6NK53 670 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 LEFTY2O00292 366 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 TM4SF5O14894 197 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 NFATC1O95644 943 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 WARSP23381 471 aaKnown RBP16.58■□□□□ 0.24
NME3-211ENST00000568561 CACNA2D1P54289 1103 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 ELF2Q15723 593 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 DUOXA2Q1HG44 320 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 GAB4Q2WGN9 574 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 DENND5BQ6ZUT9 1274 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 SFTPA1Q8IWL2 248 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 RDH13Q8NBN7 331 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 TSTD1Q8NFU3 115 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 DDX1Q92499 740 aaKnown RBP16.58■□□□□ 0.24
NME3-211ENST00000568561 EXOC4Q96A65 974 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 PCED1BQ96HM7 432 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 VPS45Q9NRW7 570 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 TMEM30AQ9NV96 361 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 TRPM5Q9NZQ8 1165 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 PCDHGA5Q9Y5G8 931 aa16.58■□□□□ 0.24
NME3-211ENST00000568561 IGF2RP11717 2491 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 F8VP50 259 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 ABL1P00519 1130 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 CYP17A1P05093 508 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
NME3-211ENST00000568561 ANXA13P27216 316 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 MESP2Q0VG99 397 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 IFRD2Q12894 506 aaPredicted RBP16.57■□□□□ 0.24
NME3-211ENST00000568561 NR1H3Q13133 447 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 STK38Q15208 465 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 RNF43Q68DV7 783 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 ANO7Q6IWH7 933 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 VSTM1Q6UX27 236 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 DPH6Q7L8W6 267 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 HS2ST1Q7LGA3 356 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 TRAPPC11Q7Z392 1133 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 TTC30AQ86WT1 665 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 WDR49Q8IV35 697 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 CCDC33Q8N5R6 958 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 USP33Q8TEY7 942 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 SPATA17Q96L03 361 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 EDEM2Q9BV94 578 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 RNF38Q9H0F5 515 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 DPEP3Q9H4B8 488 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 CPQQ9Y646 472 aa16.57■□□□□ 0.24
NME3-211ENST00000568561 K7EQS6 105 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
NME3-211ENST00000568561 TCF3P15923 654 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 BCKDHBP21953 392 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 PMLP29590 882 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 CYP2J2P51589 502 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 ASIC1P78348 528 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 E2F4Q16254 413 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
NME3-211ENST00000568561 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 DHX58Q96C10 678 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 TRIM9Q9C026 710 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 ZNF518BQ9C0D4 1074 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 SNX25Q9H3E2 840 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 ZDHHC4Q9NPG8 344 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 EBF1Q9UH73 591 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 ANGPTL2Q9UKU9 493 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 CFAP47Q6ZTR5 3102 aa16.56■□□□□ 0.24
NME3-211ENST00000568561 MYO18AQ92614 2054 aaKnown RBP16.55■□□□□ 0.24
NME3-211ENST00000568561 TNRC6BQ9UPQ9 1833 aaKnown RBP16.55■□□□□ 0.24
NME3-211ENST00000568561 BCLAF3A2AJT9 711 aaKnown RBP16.55■□□□□ 0.24
NME3-211ENST00000568561 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 CLIC2O15247 247 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 TGFB1I1O43294 461 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 RHOBTB1O94844 696 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 KCNK5O95279 499 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 CST3P01034 146 aaPredicted RBP16.55■□□□□ 0.24
NME3-211ENST00000568561 HNRNPLP14866 589 aaKnown RBP eCLIP16.55■□□□□ 0.24
NME3-211ENST00000568561 TNNI1P19237 187 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 CASP1P29466 404 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 SLC6A11P48066 632 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 NASPP49321 788 aaPredicted RBP16.55■□□□□ 0.24
NME3-211ENST00000568561 SURF1Q15526 300 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 MAPRE1Q15691 268 aaKnown RBP16.55■□□□□ 0.24
NME3-211ENST00000568561 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 OR6B3Q8NGW1 331 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 CGRRF1Q99675 332 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 TTLL2Q9BWV7 592 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 AGPAT3Q9NRZ7 376 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 CFAP97Q9P2B7 532 aa16.55■□□□□ 0.24
NME3-211ENST00000568561 GON4LQ3T8J9 2241 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms