RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 SDHAF4Q5VUM1 108 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 TXNDC8Q6A555 127 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 SCARA3Q6AZY7 606 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 PRR23BQ6ZRT6 265 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 MON1AQ86VX9 555 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 ADGRF2Q8IZF7 708 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 LINC00301Q8NCQ3 95 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 STKLD1Q8NE28 680 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 MRPS31Q92665 395 aaKnown RBP9.85□□□□□ -0.83
CDH13-210ENST00000567445 USP13Q92995 863 aaPredicted RBP9.85□□□□□ -0.83
CDH13-210ENST00000567445 TRMT2BQ96GJ1 504 aaKnown RBP9.85□□□□□ -0.83
CDH13-210ENST00000567445 MYRFLQ96LU7 910 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 LRRC27Q9C0I9 530 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 TNMDQ9H2S6 317 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 KIF9Q9HAQ2 790 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 UXTQ9UBK9 157 aaPredicted RBP9.85□□□□□ -0.83
CDH13-210ENST00000567445 GTF3C4Q9UKN8 822 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 KIF26AQ9ULI4 1882 aaPredicted RBP9.85□□□□□ -0.83
CDH13-210ENST00000567445 USP18Q9UMW8 372 aa9.85□□□□□ -0.83
CDH13-210ENST00000567445 R3HCC1Q9Y3T6 440 aaKnown RBP9.85□□□□□ -0.83
CDH13-210ENST00000567445 ZNF638Q14966 1978 aaKnown RBP9.84□□□□□ -0.83
CDH13-210ENST00000567445 ZNF233A6NK53 670 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 SPTLC2O15270 562 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 NOL4O94818 638 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 TNNC2P02585 160 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 RETP07949 1114 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 SKOR1P84550 965 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 ZNF268Q14587 947 aaPredicted RBP9.84□□□□□ -0.83
CDH13-210ENST00000567445 SURF1Q15526 300 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 HEATR6Q6AI08 1181 aaKnown RBP9.84□□□□□ -0.83
CDH13-210ENST00000567445 CC2D1AQ6P1N0 951 aaPredicted RBP9.84□□□□□ -0.83
CDH13-210ENST00000567445 DPH6Q7L8W6 267 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 LONP2Q86WA8 852 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 OSTM1Q86WC4 334 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 CBWD2Q8IUF1 395 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 SPATA2LQ8IUW3 424 aaPredicted RBP9.84□□□□□ -0.83
CDH13-210ENST00000567445 GLIS3Q8NEA6 775 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 HPS3Q969F9 1004 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 FUBP3Q96I24 572 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDH13-210ENST00000567445 ANKRD36BP1Q96IX9 119 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 CUEDC2Q9H467 287 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 EBF3Q9H4W6 596 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 PARD6AQ9NPB6 346 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 HPS4Q9NQG7 708 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 INTS13Q9NVM9 706 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 C2orf42Q9NWW7 574 aa9.84□□□□□ -0.83
CDH13-210ENST00000567445 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
CDH13-210ENST00000567445 OBSL1O75147 1896 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 OTOL1A6NHN0 477 aaPredicted RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 K7ELQ4 463 aaPredicted RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 TRDMT1O14717 391 aaKnown RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 AXIN1O15169 862 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 HCRTO43612 131 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 LRP3O75074 770 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 PPP6R2O75170 966 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 TADA3O75528 432 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 CCNYL3P0C7X3 344 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 HOXD13P35453 343 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 MAGEA11P43364 429 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 ATXN1P54253 815 aaKnown RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 AMPD3Q01432 767 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 AMPD2Q01433 879 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 SPEM2Q0P670 501 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 GRSF1Q12849 480 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDH13-210ENST00000567445 PDGFRLQ15198 375 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 QPCTQ16769 361 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 DUOXA2Q1HG44 320 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 TMEM196Q5HYL7 178 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 LMBRD2Q68DH5 695 aaPredicted RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 TRIM68Q6AZZ1 485 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 FSTL4Q6MZW2 842 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 FAM171BQ6P995 826 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 C4orf50Q6ZRC1 276 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 LIMS2Q7Z4I7 341 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 OR5B17Q8NGF7 314 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 KBTBD7Q8WVZ9 684 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 HPDLQ96IR7 371 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 ZNF396Q96N95 335 aaPredicted RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 TRIM9Q9C026 710 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 ALG2Q9H553 416 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 KIAA1586Q9HCI6 787 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 HSPBP1Q9NZL4 362 aa9.83□□□□□ -0.84
CDH13-210ENST00000567445 KIAA1522Q9P206 1035 aaPredicted RBP9.83□□□□□ -0.84
CDH13-210ENST00000567445 PTPRJQ12913 1337 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 TRAV19A0A0A6YYK7 116 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 EIF3DO15371 548 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDH13-210ENST00000567445 ATG13O75143 517 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 USP17L7P0C7H9 530 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 ARSAP15289 507 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
CDH13-210ENST00000567445 ASIC1P78348 528 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 FAM160A1Q05DH4 1040 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 SRSF5Q13243 272 aaKnown RBP9.82□□□□□ -0.84
CDH13-210ENST00000567445 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
CDH13-210ENST00000567445 PTPRNQ16849 979 aa9.82□□□□□ -0.84
CDH13-210ENST00000567445 CNNM4Q6P4Q7 775 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms