RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ELMO3Q96BJ8 720 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 SPATA32Q96LK8 384 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 CEP295NLQ96MC4 621 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 TTLL2Q9BWV7 592 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 USP25Q9UHP3 1055 aa19.54■□□□□ 0.72
USB1-213ENST00000566292 MYH10P35580 1976 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 RALGAPA1Q6GYQ0 2036 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 TRIM66O15016 1216 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 PHACTR2O75167 634 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 C4BPAP04003 597 aaKnown RBP19.53■□□□□ 0.72
USB1-213ENST00000566292 ANXA13P27216 316 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 LPAL2Q16609 132 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 NAIF1Q69YI7 327 aaPredicted RBP19.53■□□□□ 0.72
USB1-213ENST00000566292 SLC9A9Q8IVB4 645 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 TTC16Q8NEE8 873 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 SH3RF2Q8TEC5 729 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 TMEM174Q8WUU8 243 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 OSCP1Q8WVF1 389 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 C8orf48Q96LL4 319 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 ZNF518BQ9C0D4 1074 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 SMYD3Q9H7B4 428 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 VRTNQ9H8Y1 702 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 FBRSL1Q9HCM7 1045 aaKnown RBP19.53■□□□□ 0.72
USB1-213ENST00000566292 DUS2Q9NX74 493 aaKnown RBP19.53■□□□□ 0.72
USB1-213ENST00000566292 WNT6Q9Y6F9 365 aa19.53■□□□□ 0.72
USB1-213ENST00000566292 A8MXQ7 604 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 CLDN5O00501 218 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 HRO43593 1189 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 VNN1O95497 513 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 TCF3P15923 654 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 HDCP19113 662 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 GJA4P35212 333 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 RAP1GAPP47736 663 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 CDH8P55286 799 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
USB1-213ENST00000566292 DLG4P78352 724 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 KRT85P78386 507 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 ZXDBP98169 803 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 SRSF5Q13243 272 aaKnown RBP19.52■□□□□ 0.72
USB1-213ENST00000566292 BIRC3Q13489 604 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 KCNB1Q14721 858 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 HEATR6Q6AI08 1181 aaKnown RBP19.52■□□□□ 0.72
USB1-213ENST00000566292 ERMP1Q7Z2K6 904 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 B3GALNT2Q8NCR0 500 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 B3GNT5Q9BYG0 378 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 ECT2Q9H8V3 914 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 TRPM5Q9NZQ8 1165 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 ARHGAP26Q9UNA1 814 aa19.52■□□□□ 0.72
USB1-213ENST00000566292 SPAG17Q6Q759 2223 aa19.52■□□□□ 0.71
USB1-213ENST00000566292 FAM237AA0A1B0GTK4 181 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 PDXKO00764 312 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 EGFP01133 1207 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 NR3C1P04150 777 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 TGM1P22735 817 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 SYKP43405 635 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 GALK1P51570 392 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 NDUFA8P51970 172 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 AP3M2P53677 418 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 FOXK2Q01167 660 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 GRSF1Q12849 480 aaKnown RBP eCLIP19.51■□□□□ 0.71
USB1-213ENST00000566292 NCOA4Q13772 614 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 ZNF699Q32M78 642 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 EML3Q32P44 896 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 LONP2Q86WA8 852 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 CPA6Q8N4T0 437 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 SECISBP2LQ93073 1101 aaKnown RBP19.51■□□□□ 0.71
USB1-213ENST00000566292 ELOVL4Q9GZR5 314 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 SDCBP2Q9H190 292 aa19.51■□□□□ 0.71
USB1-213ENST00000566292 MYOFQ9NZM1 2061 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 ZNF840PA6NDX5 716 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 RPN1P04843 607 aaKnown RBP19.5■□□□□ 0.71
USB1-213ENST00000566292 MYL1P05976 194 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 HOXA6P31267 233 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 IFNAR2P48551 515 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 ZNF667Q5HYK9 610 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 SCARA5Q6ZMJ2 495 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 PRR23BQ6ZRT6 265 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 ATP2A3Q93084 1043 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 RNF38Q9H0F5 515 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 LINC00597Q9H2U6 94 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 PARD6AQ9NPB6 346 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 GMEB2Q9UKD1 530 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 RAB23Q9ULC3 237 aa19.5■□□□□ 0.71
USB1-213ENST00000566292 RNF40O75150 1001 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 PFKLP17858 780 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 PDE6CP51160 858 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 AMPD2Q01433 879 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 TAF10Q12962 218 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 SIM2Q14190 667 aaPredicted RBP19.49■□□□□ 0.71
USB1-213ENST00000566292 C1orf220Q5T0J3 134 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 LAIR1Q6GTX8 287 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 PAQR9Q6ZVX9 377 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 GPR161Q8N6U8 529 aaKnown RBP19.49■□□□□ 0.71
USB1-213ENST00000566292 TMC2Q8TDI7 906 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 EZH1Q92800 747 aaPredicted RBP19.49■□□□□ 0.71
USB1-213ENST00000566292 P2RY13Q9BPV8 354 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 DLL3Q9NYJ7 618 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 EHD2Q9NZN4 543 aa19.49■□□□□ 0.71
USB1-213ENST00000566292 LEFTY2O00292 366 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms