RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 AIFM3Q96NN9 605 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 IL21RQ9HBE5 538 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 ARHGEF4Q9NR80 690 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 PDRG1Q9NUG6 133 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 CALCOCO1Q9P1Z2 691 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 KCNG1Q9UIX4 513 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 CYP8B1Q9UNU6 501 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 NFE2L3Q9Y4A8 694 aa9.75□□□□□ -0.85
VPS9D1-205ENST00000565452 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 CLDN3O15551 220 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 TLX3O43711 291 aaPredicted RBP9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 TOM1L1O75674 476 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 CDK4P11802 303 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 C6P13671 934 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 NTSR1P30989 418 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 HNF1BP35680 557 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 NEK4P51957 841 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 STRN3Q13033 797 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 RESTQ13127 1097 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 RABEP1Q15276 862 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 DHCR24Q15392 516 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 KYAT1Q16773 422 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 HLA-BQ31612 363 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 SEZ6Q53EL9 994 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 ZNF513Q8N8E2 541 aaPredicted RBP9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 KRI1Q8N9T8 703 aaKnown RBP9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 TRMT2BQ96GJ1 504 aaKnown RBP9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 ZBTB45Q96K62 511 aaPredicted RBP9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 MYRFLQ96LU7 910 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 KMT5AQ9NQR1 393 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 GCNT4Q9P109 453 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 ARHGAP26Q9UNA1 814 aa9.74□□□□□ -0.85
VPS9D1-205ENST00000565452 KIF26AQ9ULI4 1882 aaPredicted RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 TTC26A0AVF1 554 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 MEI4A8MW99 385 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 LACTBL1A8MY62 500 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 PYCARD-AS1I3L0S3 204 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 LEFTY2O00292 366 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 CYB561D2O14569 222 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 ABLIM1O14639 778 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 BCAT2O15382 392 aaPredicted RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 SLC28A2O43868 658 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 NEMFO60524 1076 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 MED24O75448 989 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 NOL4O94818 638 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 ADH1CP00326 375 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 CYP17A1P05093 508 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 HOXB2P14652 356 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 PFKLP17858 780 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 MUTP22033 750 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 RPA1P27694 616 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 MATR3P43243 847 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 GRK6P43250 576 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 PPP2R3AQ06190 1150 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 NOLC1Q14978 699 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 DDR2Q16832 855 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 GAB4Q2WGN9 574 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 ZC2HC1CQ53FD0 456 aaPredicted RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 RHBDF2Q6PJF5 856 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 DHRS13Q6UX07 377 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 SFTPA1Q8IWL2 248 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 CADM4Q8NFZ8 388 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 SNIP1Q8TAD8 396 aaKnown RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 MTMR9Q96QG7 549 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 NRSN2Q9GZP1 204 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 RPF1Q9H9Y2 349 aaKnown RBP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 ZDHHC4Q9NPG8 344 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 IL17BQ9UHF5 180 aa9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS9D1-205ENST00000565452 NUP210Q8TEM1 1887 aaPredicted RBP9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 CXCL8P10145 99 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 CHRM1P11229 460 aaPredicted RBP9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 CD6P30203 668 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 ACTN2P35609 894 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 TSPY1Q01534 308 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 TLE3Q04726 772 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 MCL1Q07820 350 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 TOB2Q14106 344 aaPredicted RBP9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 RTP5Q14D33 572 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 PTPRNQ16849 979 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 BROXQ5VW32 411 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 SPATA1Q5VX52 437 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 BTBD8Q5XKL5 378 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 FILIP1Q7Z7B0 1213 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 FMNL3Q8IVF7 1028 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 ZSCAN31Q96LW9 406 aaPredicted RBP9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 C17orf75Q9HAS0 396 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 ARHGAP28Q9P2N2 729 aa9.72□□□□□ -0.85
VPS9D1-205ENST00000565452 DEC1Q9P2X7 70 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms