RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 CCDC34Q96HJ3 373 aa5.31□□□□□ -1.56
CHD9-214ENST00000565119 PPP1R10Q96QC0 940 aaKnown RBP5.31□□□□□ -1.56
CHD9-214ENST00000565119 UHRF1Q96T88 793 aaPredicted RBP5.31□□□□□ -1.56
CHD9-214ENST00000565119 EIF2AK1Q9BQI3 630 aaKnown RBP5.31□□□□□ -1.56
CHD9-214ENST00000565119 PRKRIP1Q9H875 184 aaPredicted RBP5.31□□□□□ -1.56
CHD9-214ENST00000565119 ATP6V0A4Q9HBG4 840 aa5.31□□□□□ -1.56
CHD9-214ENST00000565119 VSX1Q9NZR4 365 aaPredicted RBP5.31□□□□□ -1.56
CHD9-214ENST00000565119 EPS15L1Q9UBC2 864 aa5.31□□□□□ -1.56
CHD9-214ENST00000565119 PRAMEF33A0A0G2JMD5 474 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 CDHR4A6H8M9 788 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 PRAMEF10O60809 474 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 MBD4O95243 580 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 BAG2O95816 211 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 CYP2D6P10635 497 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 IDEP14735 1019 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 ZNF132P52740 706 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 PROSER3Q2NL68 480 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 TUBB8Q3ZCM7 444 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 ARHGAP29Q52LW3 1261 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 VPS53Q5VIR6 699 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 KIAA1161Q6NSJ0 714 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 PLBD1Q6P4A8 553 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 TBC1D1Q86TI0 1168 aaPredicted RBP5.3□□□□□ -1.56
CHD9-214ENST00000565119 KRT73Q86Y46 540 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 FITM2Q8N6M3 262 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 ZNF713Q8N859 430 aaPredicted RBP5.3□□□□□ -1.56
CHD9-214ENST00000565119 ACRBPQ8NEB7 543 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 PARD3BQ8TEW8 1205 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 SPAG5Q96R06 1193 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 MAP3K14Q99558 947 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 NUP88Q99567 741 aaPredicted RBP5.3□□□□□ -1.56
CHD9-214ENST00000565119 NAA15Q9BXJ9 866 aaKnown RBP5.3□□□□□ -1.56
CHD9-214ENST00000565119 VPS16Q9H269 839 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 GSTO2Q9H4Y5 243 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 AGO4Q9HCK5 861 aaKnown RBP5.3□□□□□ -1.56
CHD9-214ENST00000565119 DDX20Q9UHI6 824 aaKnown RBP5.3□□□□□ -1.56
CHD9-214ENST00000565119 ZBTB21Q9ULJ3 1066 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 GPR52Q9Y2T5 361 aa5.3□□□□□ -1.56
CHD9-214ENST00000565119 hCG_1642624A0A1W2PR95 340 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 SMTNL1A8MU46 457 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 NCAM2O15394 837 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 ZEB2O60315 1214 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 NHLRC4P0CG21 123 aaPredicted RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 PF4V1P10720 104 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 DRD4P21917 467 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 HOXD12P35452 270 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 MAPK9P45984 424 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 SMC1AQ14683 1233 aaKnown RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 KRTAP27-1Q3LI81 207 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 TTC31Q49AM3 519 aaPredicted RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 ATP13A4Q4VNC1 1196 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 FAAH2Q6GMR7 532 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 RETSATQ6NUM9 610 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 HIBCHQ6NVY1 386 aaPredicted RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 TLDC1Q6P9B6 456 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 FASTKD5Q7L8L6 764 aaKnown RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 CAMKK1Q8N5S9 505 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 CCT6BQ92526 530 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 EAF2Q96CJ1 260 aaPredicted RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 RSRC1Q96IZ7 334 aaKnown RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 SGCZQ96LD1 299 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 SENP6Q9GZR1 1112 aaPredicted RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.29□□□□□ -1.56
CHD9-214ENST00000565119 C1orf112Q9NSG2 853 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 NKIRAS2Q9NYR9 191 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
CHD9-214ENST00000565119 SNX5Q9Y5X3 404 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 ACTL7AQ9Y615 435 aa5.29□□□□□ -1.56
CHD9-214ENST00000565119 TISP43B9A030 160 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 AREL1O15033 823 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 SNUPNO95149 360 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 TPM2P07951 284 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 IFIT1P09914 478 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 BPIP17213 487 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 RHCEP18577 417 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 GALNSP34059 522 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 CTNNA1P35221 906 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 MMP13P45452 471 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 RECQLP46063 649 aaPredicted RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 NEK4P51957 841 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 HNRNPMP52272 730 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHD9-214ENST00000565119 SNX16P57768 344 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 RPS7P62081 194 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 KRT85P78386 507 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 RHDQ02161 417 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 FPGSQ05932 587 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 BTKQ06187 659 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 RABEP1Q15276 862 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 DNAJC21Q5F1R6 531 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 CPLX2Q6PUV4 134 aaKnown RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 C4orf50Q6ZRC1 276 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 DAAM2Q86T65 1068 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 CBARPQ8N350 705 aaPredicted RBP5.28□□□□□ -1.56
CHD9-214ENST00000565119 TBC1D15Q8TC07 691 aa5.28□□□□□ -1.56
CHD9-214ENST00000565119 ZFPM2Q8WW38 1151 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms