RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CCDC122Q5T0U0 273 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 C10orf76Q5T2E6 689 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 RAD9BQ6WBX8 426 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 SPATA2LQ8IUW3 424 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-208ENST00000564247 ANKRD52Q8NB46 1076 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 TMEM35BQ8NCS4 154 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 SLC30A5Q8TAD4 765 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 SLC2A14Q8TDB8 520 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 NECTIN4Q96NY8 510 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 EIF3CQ99613 913 aaKnown RBP17.93■□□□□ 0.46
CMTM3-208ENST00000564247 LPIN3Q9BQK8 851 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 SYT11Q9BT88 431 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 ZNF518BQ9C0D4 1074 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 LHX5Q9H2C1 402 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 KCNF1Q9H3M0 494 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 SFXN1Q9H9B4 322 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 TSPAN16Q9UKR8 245 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.93■□□□□ 0.46
CMTM3-208ENST00000564247 TRIOO75962 3097 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 TSC2P49815 1807 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 A0A087X0T9 212 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 M0QYV0 167 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 DDX3XO00571 662 aaKnown RBP eCLIP17.92■□□□□ 0.46
CMTM3-208ENST00000564247 TBC1D4O60343 1298 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 LSM8O95777 96 aaKnown RBP17.92■□□□□ 0.46
CMTM3-208ENST00000564247 GLUD1P00367 558 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 FAM228BP0C875 321 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 GZMAP12544 262 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 CCDC130P13994 396 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 ADORA2BP29275 332 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 MTHFRP42898 656 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 GFPT1Q06210 699 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-208ENST00000564247 GPR17Q13304 367 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 SLC39A12Q504Y0 691 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 RARS2Q5T160 578 aaKnown RBP17.92■□□□□ 0.46
CMTM3-208ENST00000564247 ALKBH5Q6P6C2 394 aaKnown RBP17.92■□□□□ 0.46
CMTM3-208ENST00000564247 ELMSAN1Q6PJG2 1045 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 LRRTM3Q86VH5 581 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 TXLNBQ8N3L3 684 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 C12orf76Q8N812 135 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-208ENST00000564247 MYLPFQ96A32 169 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 PCED1BQ96HM7 432 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 NOX5Q96PH1 765 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 TMEM209Q96SK2 561 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 ZSWIM1Q9BR11 485 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 B3GNT5Q9BYG0 378 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 EPHX3Q9H6B9 360 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 SPTLC3Q9NUV7 552 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 CDY1Q9Y6F8 540 aa17.92■□□□□ 0.46
CMTM3-208ENST00000564247 RTN2O75298 545 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 SETSIPP0DME0 302 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 OR1D2P34982 312 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 MAGEA1P43355 309 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 SNX16P57768 344 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 MTF1Q14872 753 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 CLEC16AQ2KHT3 1053 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 SLC8B1Q6J4K2 584 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 ACAD10Q6JQN1 1059 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 DENND1BQ6P3S1 775 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 PASD1Q8IV76 773 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 FUKQ8N0W3 1084 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 MSANTD4Q8NCY6 345 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 UBA3Q8TBC4 463 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 C2orf15Q8WU43 125 aaKnown RBP17.91■□□□□ 0.46
CMTM3-208ENST00000564247 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 RIPOR3Q96MK2 946 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 PCDHB18PQ96TA0 734 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 PKMYT1Q99640 499 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 C1QTNF1Q9BXJ1 281 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 DUSP16Q9BY84 665 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 MAN1C1Q9NR34 630 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 NAGPAQ9UK23 515 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 PCDHB5Q9Y5E4 795 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
CMTM3-208ENST00000564247 MYH10P35580 1976 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 C2orf16Q68DN1 1984 aa17.91■□□□□ 0.46
CMTM3-208ENST00000564247 TMCO5BA8MYB1 307 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 LCA5LO95447 670 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 CYP1A1P04798 512 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-208ENST00000564247 CFHP08603 1231 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 OR4Q2P0C623 313 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 FAM200BP0CF97 657 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 ALADP13716 330 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 NSFP46459 744 aaKnown RBP17.9■□□□□ 0.46
CMTM3-208ENST00000564247 BCAT1P54687 386 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 BST2Q10589 180 aaKnown RBP17.9■□□□□ 0.46
CMTM3-208ENST00000564247 ATAT1Q5SQI0 421 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 TPGS2Q68CL5 300 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 LILRA6Q6PI73 481 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 TMC5Q6UXY8 1006 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 GPR149Q86SP6 731 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 RNF135Q8IUD6 432 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 CMASQ8NFW8 434 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-208ENST00000564247 SMARCD1Q96GM5 515 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 FUBP3Q96I24 572 aaKnown RBP eCLIP17.9■□□□□ 0.46
CMTM3-208ENST00000564247 RPGRIP1Q96KN7 1286 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 CLSTN3Q9BQT9 956 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 PLEKHA4Q9H4M7 779 aa17.9■□□□□ 0.46
CMTM3-208ENST00000564247 CDH22Q9UJ99 828 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms