RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 SMARCAD1Q9H4L7 1026 aa6.64□□□□□ -1.35
TCF4-213ENST00000562543 ZNF287Q9HBT7 754 aa6.64□□□□□ -1.35
TCF4-213ENST00000562543 HDAC5Q9UQL6 1122 aa6.64□□□□□ -1.35
TCF4-213ENST00000562543 STAB1Q9NY15 2570 aa6.64□□□□□ -1.35
TCF4-213ENST00000562543 NUP210Q8TEM1 1887 aaPredicted RBP6.64□□□□□ -1.35
TCF4-213ENST00000562543 LRRK1Q38SD2 2015 aa6.64□□□□□ -1.35
TCF4-213ENST00000562543 A1L4Q6 167 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 VPS37CA5D8V6 355 aaPredicted RBP6.63□□□□□ -1.35
TCF4-213ENST00000562543 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 FLRT2O43155 660 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 TNFSF14O43557 240 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 EGFP01133 1207 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 RNF224P0DH78 156 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 JUPP14923 745 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 ADRA1BP35368 520 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 ADD2P35612 726 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 NOVP48745 357 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 TFAP4Q01664 338 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 GRSF1Q12849 480 aaKnown RBP eCLIP6.63□□□□□ -1.35
TCF4-213ENST00000562543 GRIK2Q13002 908 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 TARDBPQ13148 414 aaKnown RBP eCLIP6.63□□□□□ -1.35
TCF4-213ENST00000562543 IKZF1Q13422 519 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 KCNMB1Q16558 191 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 GNPTABQ3T906 1256 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 DIEXFQ68CQ4 756 aaKnown RBP6.63□□□□□ -1.35
TCF4-213ENST00000562543 ANO7Q6IWH7 933 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 CILP2Q8IUL8 1156 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 SULF2Q8IWU5 870 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 DHX40Q8IX18 779 aaKnown RBP6.63□□□□□ -1.35
TCF4-213ENST00000562543 FRMD1Q8N878 549 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 CHFRQ96EP1 664 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 ZNF469Q96JG9 3925 aaPredicted RBP6.63□□□□□ -1.35
TCF4-213ENST00000562543 FAM84AQ96KN4 292 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 SENP7Q9BQF6 1050 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 CLSTN3Q9BQT9 956 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 TTPALQ9BTX7 342 aa6.63□□□□□ -1.35
TCF4-213ENST00000562543 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.63□□□□□ -1.35
TCF4-213ENST00000562543 PRG3Q9Y2Y8 225 aaPredicted RBP6.63□□□□□ -1.35
TCF4-213ENST00000562543 A0A1W2PQD8 194 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 F8W810 466 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 TRDMT1O14717 391 aaKnown RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 KLK10O43240 276 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 FIBPO43427 364 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 LRG1P02750 347 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 CCR2P41597 374 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 MRPS9P82933 396 aaKnown RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 AXDND1Q5T1B0 1012 aaPredicted RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 LMBRD2Q68DH5 695 aaPredicted RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 YAF2Q8IY57 180 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 GPBAR1Q8TDU6 330 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 SSC4DQ8WTU2 575 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 KCNE4Q8WWG9 221 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 RLN3Q8WXF3 142 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 SEPT1Q8WYJ6 367 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 E2F7Q96AV8 911 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 ZNF578Q96N58 590 aaPredicted RBP6.62□□□□□ -1.35
TCF4-213ENST00000562543 PCYT2Q99447 389 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 TRAIPQ9BWF2 469 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 DPH1Q9BZG8 443 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 IL17RBQ9NRM6 502 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 SNTG2Q9NY99 539 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 DACT1Q9NYF0 836 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 BTBD3Q9Y2F9 522 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 WNT6Q9Y6F9 365 aa6.62□□□□□ -1.35
TCF4-213ENST00000562543 ARHGEF17Q96PE2 2063 aaPredicted RBP6.61□□□□□ -1.35
TCF4-213ENST00000562543 NMT2O60551 498 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 PPFIA2O75334 1257 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 AGFG2O95081 481 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 PDHBP11177 359 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 SFTPCP11686 197 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 CFPP27918 469 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 PPP2R3AQ06190 1150 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 RALBP1Q15311 655 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 CDC37Q16543 378 aaPredicted RBP6.61□□□□□ -1.35
TCF4-213ENST00000562543 NKPD1Q17RQ9 610 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 USP41Q3LFD5 358 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 LONRF3Q496Y0 759 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 FBXO43Q4G163 708 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 CCDC157Q569K6 752 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 RRP12Q5JTH9 1297 aaKnown RBP6.61□□□□□ -1.35
TCF4-213ENST00000562543 PRSS55Q6UWB4 352 aaPredicted RBP6.61□□□□□ -1.35
TCF4-213ENST00000562543 USP49Q70CQ1 688 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 RTL10Q7L3V2 364 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 MAMDC2Q7Z304 686 aaPredicted RBP6.61□□□□□ -1.35
TCF4-213ENST00000562543 GRIN3AQ8TCU5 1115 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 TNPO1Q92973 898 aaKnown RBP6.61□□□□□ -1.35
TCF4-213ENST00000562543 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 ZFYVE19Q96K21 471 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 MEIS3Q99687 375 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 GPR62Q9BZJ7 368 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 ZDHHC5Q9C0B5 715 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 IL21RQ9HBE5 538 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 TM7SF3Q9NS93 570 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 CTNND2Q9UQB3 1225 aa6.61□□□□□ -1.35
TCF4-213ENST00000562543 MRPL11Q9Y3B7 192 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms