RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
PKD1-225ENST00000562297 INPPL1O15357 1258 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 KRT1P04264 644 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 COPS2P61201 443 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 HLTFQ14527 1009 aaKnown RBP eCLIP17.4■□□□□ 0.38
PKD1-225ENST00000562297 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 PAQR9Q6ZVX9 377 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 SCUBE3Q8IX30 993 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 SH3TC2Q8TF17 1288 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
PKD1-225ENST00000562297 CNPY3Q9BT09 278 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 DPH5Q9H2P9 285 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 CYLDQ9NQC7 956 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 RGS18Q9NS28 235 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 ZDHHC18Q9NUE0 388 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 DDX56Q9NY93 547 aaKnown RBP17.4■□□□□ 0.38
PKD1-225ENST00000562297 TRIM17Q9Y577 477 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 TET1Q8NFU7 2136 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 POMCP01189 267 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 SKIP12755 728 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 GPD1P21695 349 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
PKD1-225ENST00000562297 OAS2P29728 719 aaKnown RBP17.4■□□□□ 0.38
PKD1-225ENST00000562297 CDKN2BP42772 138 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 SLC6A3Q01959 620 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 CD300LGQ6UXG3 332 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 ZDHHC17Q8IUH5 632 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 CCDC105Q8IYK2 499 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 RXFP2Q8WXD0 754 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 LINC01599Q8WXQ3 324 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 ZBTB9Q96C00 473 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 PGBD4Q96DM1 585 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 TRIM31Q9BZY9 425 aa17.4■□□□□ 0.38
PKD1-225ENST00000562297 hCG_1818297A0A087WSY0 165 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 C9IYK1 514 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 AGPSO00116 658 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 GRAP2O75791 330 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 KRT10P13645 584 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 PTPN1P18031 435 aaKnown RBP17.39■□□□□ 0.37
PKD1-225ENST00000562297 MIPP30301 263 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 PCK1P35558 622 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 CDK7P50613 346 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 GRIK3Q13003 919 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 TAZQ16635 292 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 SH3PXD2AQ5TCZ1 1133 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 CYP4V2Q6ZWL3 525 aaPredicted RBP17.39■□□□□ 0.37
PKD1-225ENST00000562297 TMEM86AQ8N2M4 240 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 DNAI2Q9GZS0 605 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 UBN1Q9NPG3 1134 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 GRHL1Q9NZI5 618 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 RASAL2Q9UJF2 1139 aa17.39■□□□□ 0.37
PKD1-225ENST00000562297 DPYSL4O14531 572 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 KRT7P08729 469 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 PDGFRAP16234 1089 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 SNX1Q13596 522 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 CCNG2Q16589 344 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 SMTNL2Q2TAL5 461 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 TIGD5Q53EQ6 642 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 RAB6CQ53S08 254 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 KCNT1Q5JUK3 1230 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 RAB6CQ9H0N0 254 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 UNC93B1Q9H1C4 597 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 CRTAC1Q9NQ79 661 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 ASNSD1Q9NWL6 643 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 DDX43Q9NXZ2 648 aaKnown RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 PTPN22Q9Y2R2 807 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 LRRD1A4D1F6 860 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 CAPN15O75808 1086 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 HSPA9P38646 679 aaKnown RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 RPL21P46778 160 aaKnown RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 HADHQ16836 314 aaKnown RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 C15orf59Q2T9L4 293 aaPredicted RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 CCDC14Q49A88 953 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 TFDP3Q5H9I0 405 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 ZDHHC24Q6UX98 284 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 ZNF771Q7L3S4 317 aaPredicted RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 CMASQ8NFW8 434 aaPredicted RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 CLEC4CQ8WTT0 213 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 HSFY1Q96LI6 401 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 PEBP4Q96S96 227 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 DUSP16Q9BY84 665 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 ZWILCHQ9H900 591 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 HOMER3Q9NSC5 361 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 USP18Q9UMW8 372 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 SNX24Q9Y343 169 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 TIMM13Q9Y5L4 95 aaPredicted RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 PTPRDP23468 1912 aa17.38■□□□□ 0.37
PKD1-225ENST00000562297 MKI67P46013 3256 aaKnown RBP17.38■□□□□ 0.37
PKD1-225ENST00000562297 KBTBD13C9JR72 458 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 CLDN5O00501 218 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 XPO1O14980 1071 aaKnown RBP17.37■□□□□ 0.37
PKD1-225ENST00000562297 RNF8O76064 485 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 ECEL1O95672 775 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 TRUB2O95900 331 aaKnown RBP17.37■□□□□ 0.37
PKD1-225ENST00000562297 SYF2O95926 243 aaKnown RBP17.37■□□□□ 0.37
PKD1-225ENST00000562297 SCNN1AP37088 669 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 CETN2P41208 172 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 LHX1P48742 406 aa17.37■□□□□ 0.37
PKD1-225ENST00000562297 SNX16P57768 344 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms