RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMEM191BP0C7N4 346 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 CSRP1P21291 193 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 RDXP35241 583 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 DDIT3P35638 169 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 GRIK1P39086 918 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZNF131P52739 623 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 CYP27A1Q02318 531 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 KDSRQ06136 332 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 IFRD2Q12894 506 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 LMAN2Q12907 356 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 CCDC142Q17RM4 750 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 SFR1Q86XK3 245 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 NT5DC4Q86YG4 428 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 TMEFF1Q8IYR6 380 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 HDDC3Q8N4P3 179 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 ALLCQ8N6M5 410 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 MDGA1Q8NFP4 955 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 USP33Q8TEY7 942 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 LARP4BQ92615 738 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 TRMT2BQ96GJ1 504 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 CNOT6LQ96LI5 555 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 ACBD6Q9BR61 282 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 GTPBP2Q9BX10 602 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 LINC00597Q9H2U6 94 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 ABCB6Q9NP58 842 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 RBAKQ9NYW8 714 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 TBC1D7Q9P0N9 293 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 MMP17Q9ULZ9 603 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 EXOC7Q9UPT5 735 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 PCDHGA4Q9Y5G9 962 aa11.24□□□□□ -0.61
CDC42BPB-207ENST00000560492 GOLGA8IPA6NC78 632 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 GOLGA8JA6NMD2 632 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 CDX4O14627 284 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 SLC26A4O43511 780 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 HCRTO43612 131 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 GCNT3O95395 438 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 APODP05090 189 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 LHX1P48742 406 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 PSMC1P62191 440 aaKnown RBP11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 RESTQ13127 1097 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 CRY1Q16526 586 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 FILIP1Q7Z7B0 1213 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 TMEM86AQ8N2M4 240 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 KDF1Q8NAX2 398 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 TXNDC5Q8NBS9 432 aaKnown RBP11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 SPATA18Q8TC71 538 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 ZDHHC4Q9NPG8 344 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 BLOC1S4Q9NUP1 217 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 SMPD4Q9NXE4 827 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 MAGEC2Q9UBF1 373 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYH10P35580 1976 aa11.23□□□□□ -0.61
CDC42BPB-207ENST00000560492 SPAARA0A1B0GVQ0 90 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 TCRBV21S2A2A0A5A6 115 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ANTXRLA6NF34 631 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 K7EQS6 105 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 LEFTY2O00292 366 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 IGF2RP11717 2491 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ENGP17813 658 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 BDNFP23560 247 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 OPRD1P41143 372 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 SIM1P81133 766 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MRPS21P82921 87 aaKnown RBP11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 RBP5P82980 135 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYO1EQ12965 1108 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ACAP1Q15027 740 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 EOGTQ5NDL2 527 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 LYSMD4Q5XG99 296 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 RASSF3Q86WH2 238 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 KCNN1Q92952 543 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYLPFQ96A32 169 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 HVCN1Q96D96 273 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 FAM84AQ96KN4 292 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MYRFLQ96LU7 910 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ACCSQ96QU6 501 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 PNKPQ96T60 521 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MMS19Q96T76 1030 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 GCNT4Q9P109 453 aa11.22□□□□□ -0.61
CDC42BPB-207ENST00000560492 ITGA11Q9UKX5 1188 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms