RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 E2F2Q14209 437 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 IQCB1Q15051 598 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 DAB2IPQ5VWQ8 1189 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 ZNF549Q6P9A3 640 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 BCDIN3DQ7Z5W3 292 aaKnown RBP3.63□□□□□ -1.83
SPG11-222ENST00000560435 PELI3Q8N2H9 469 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 PNISRQ8TF01 805 aaKnown RBP3.63□□□□□ -1.83
SPG11-222ENST00000560435 TNPO1Q92973 898 aaKnown RBP3.63□□□□□ -1.83
SPG11-222ENST00000560435 ZFYVE19Q96K21 471 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 CAMK1GQ96NX5 476 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 SLCO5A1Q9H2Y9 848 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 TMEM184CQ9NVA4 438 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 ASIC5Q9NY37 505 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 HS3ST3B1Q9Y662 390 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 KLHL33A6NCF5 533 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 C4orf47A7E2U8 309 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 GCATO75600 419 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 MYCLP12524 364 aaPredicted RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 IARSP41252 1262 aaKnown RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 MASP1P48740 699 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 PDE6CP51160 858 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 CYP1B1Q16678 543 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 C4orf46Q504U0 113 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 COLCA1Q6ZS62 124 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 ANKRD13BQ86YJ7 626 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 DCP1BQ8IZD4 617 aaKnown RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 CBARPQ8N350 705 aaPredicted RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 CPA6Q8N4T0 437 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 MAP4K1Q92918 833 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 MMS19Q96T76 1030 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 SLKQ9H2G2 1235 aaPredicted RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 MRPL46Q9H2W6 279 aaKnown RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 SERPINB13Q9UIV8 391 aa3.62□□□□□ -1.83
SPG11-222ENST00000560435 NDRG4Q9ULP0 352 aaKnown RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 TCF20Q9UGU0 1960 aaKnown RBP3.62□□□□□ -1.83
SPG11-222ENST00000560435 PCDHGA12O60330 932 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 E2F1Q01094 437 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 CFHR1Q03591 330 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 FHL3Q13643 280 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 ANO7Q6IWH7 933 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 SFTPA1Q8IWL2 248 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.61□□□□□ -1.83
SPG11-222ENST00000560435 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 CCDC17Q96LX7 622 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 DPCDQ9BVM2 203 aaPredicted RBP3.61□□□□□ -1.83
SPG11-222ENST00000560435 FEZ2Q9UHY8 353 aaPredicted RBP3.61□□□□□ -1.83
SPG11-222ENST00000560435 PCDHGA9Q9Y5G4 932 aaKnown RBP3.61□□□□□ -1.83
SPG11-222ENST00000560435 PCDHGA8Q9Y5G5 932 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 PCDHGA7Q9Y5G6 932 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 PCDHGA6Q9Y5G7 932 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 PCDHGA3Q9Y5H0 932 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 PCDHA3Q9Y5H8 950 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 PHLDB1Q86UU1 1377 aa3.61□□□□□ -1.83
SPG11-222ENST00000560435 LACTBL1A8MY62 500 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 SLC16A6O15403 523 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 CTSAP10619 480 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 UAP1L1Q3KQV9 507 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 ZNF585BQ52M93 769 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 KRT26Q7Z3Y9 468 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 LIX1LQ8IVB5 337 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 CNTD1Q8N815 330 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 OSCP1Q8WVF1 389 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 FAXDC2Q96IV6 333 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 TEKT5Q96M29 485 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 MOGAT1Q96PD6 335 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 ABCF2Q9UG63 623 aa3.6□□□□□ -1.83
SPG11-222ENST00000560435 AP4M1O00189 453 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 XPOTO43592 962 aaKnown RBP3.59□□□□□ -1.83
SPG11-222ENST00000560435 CSF1RP07333 972 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 PHKG2P15735 406 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 VIPR2P41587 438 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 ADKP55263 362 aaKnown RBP3.59□□□□□ -1.83
SPG11-222ENST00000560435 RPS13P62277 151 aaKnown RBP3.59□□□□□ -1.83
SPG11-222ENST00000560435 KRT85P78386 507 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 NOGQ13253 232 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 TMTC4Q5T4D3 741 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 DEPDC1Q5TB30 811 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 THEMIS2Q5TEJ8 643 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 GSG1LQ6UXU4 331 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 HEATR3Q7Z4Q2 680 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 PPP1R3BQ86XI6 285 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 ATL2Q8NHH9 583 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 PRR25Q96S07 402 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 PUS7LQ9H0K6 701 aaKnown RBP3.59□□□□□ -1.83
SPG11-222ENST00000560435 MLXIPQ9HAP2 919 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 ZBTB40Q9NUA8 1239 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 AMFRQ9UKV5 643 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 SHOC2Q9UQ13 582 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 TBX22Q9Y458 520 aa3.59□□□□□ -1.83
SPG11-222ENST00000560435 SLC28A2O43868 658 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 MT-CO1P00395 513 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 MT-CO3P00414 261 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 FGAP02671 866 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 AHSGP02765 367 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 VIL1P09327 827 aaKnown RBP3.58□□□□□ -1.84
SPG11-222ENST00000560435 CNGA1P29973 690 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 LRPAP1P30533 357 aa3.58□□□□□ -1.84
SPG11-222ENST00000560435 HK3P52790 923 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms