RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 TMEM196Q5HYL7 178 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 CC2D1AQ6P1N0 951 aaPredicted RBP20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 SYNPOQ8N3V7 929 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 FSIP1Q8NA03 581 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 C8orf48Q96LL4 319 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 TTLL2Q9BWV7 592 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 SMYD3Q9H7B4 428 aa20.35■□□□□ 0.85
KNSTRN-208ENST00000559604 A8MXQ7 604 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 K7ESF4 209 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 VNN1O95497 513 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 NR3C1P04150 777 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 RPN1P04843 607 aaKnown RBP20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 PRR29P0C7W0 189 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 ID4P47928 161 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 DLG4P78352 724 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 PDGFRLQ15198 375 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 ZNF699Q32M78 642 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 FSTL4Q6MZW2 842 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 B3GALNT2Q8NCR0 500 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 ELMO3Q96BJ8 720 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 B3GNT5Q9BYG0 378 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 ZNF518BQ9C0D4 1074 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 NCDNQ9UBB6 729 aa20.34■□□□□ 0.85
KNSTRN-208ENST00000559604 CLDN5O00501 218 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 TRDMT1O14717 391 aaKnown RBP20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 HDCP19113 662 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 HOXC13P31276 330 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 RAP1GAPP47736 663 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 CDH8P55286 799 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 NOP14P78316 857 aaKnown RBP20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 NCOA4Q13772 614 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 KCNB1Q14721 858 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 ZNF667Q5HYK9 610 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 TTC16Q8NEE8 873 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 SH3RF2Q8TEC5 729 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 OSCP1Q8WVF1 389 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 ELOVL4Q9GZR5 314 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 FBRSL1Q9HCM7 1045 aaKnown RBP20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 DUS2Q9NX74 493 aaKnown RBP20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 TRPM5Q9NZQ8 1165 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 WNT6Q9Y6F9 365 aa20.33■□□□□ 0.85
KNSTRN-208ENST00000559604 CACNA1AO00555 2505 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 CHURC1-FNTBB4DL54 471 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 TCF3P15923 654 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 GJA4P35212 333 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 FNTBP49356 437 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 ZXDBP98169 803 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 DPYDQ12882 1025 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 ZACNQ401N2 412 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 NAIF1Q69YI7 327 aaPredicted RBP20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 PKN3Q6P5Z2 889 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 SDCBP2Q9H190 292 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 GOLPH3LQ9H4A5 285 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 ECT2Q9H8V3 914 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 EHD2Q9NZN4 543 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 ARHGAP26Q9UNA1 814 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 TRAF3IP3Q9Y228 551 aa20.32■□□□□ 0.84
KNSTRN-208ENST00000559604 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 ZNF840PA6NDX5 716 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 RHOBTB3O94955 611 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 PFKLP17858 780 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 GRSF1Q12849 480 aaKnown RBP eCLIP20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 EML3Q32P44 896 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 C1orf220Q5T0J3 134 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 SCARA5Q6ZMJ2 495 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 KRBA2Q6ZNG9 492 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 CPA6Q8N4T0 437 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 TMC2Q8TDI7 906 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 RMDN1Q96DB5 314 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 SCAND2PQ9GZW5 306 aaPredicted RBP20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 ATP6V1DQ9Y5K8 247 aa20.31■□□□□ 0.84
KNSTRN-208ENST00000559604 MYO16Q9Y6X6 1858 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 HRO43593 1189 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 CALUO43852 315 aaPredicted RBP20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 CLSTN1O94985 981 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 EGFP01133 1207 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 IFNAR2P48551 515 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 PDE6CP51160 858 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 GALK1P51570 392 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 AMPD2Q01433 879 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 TAF10Q12962 218 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 CEP135Q66GS9 1140 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 HEATR6Q6AI08 1181 aaKnown RBP20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 PAQR9Q6ZVX9 377 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 SV2AQ7L0J3 742 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 ATP2A3Q93084 1043 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 P2RY13Q9BPV8 354 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 RNF38Q9H0F5 515 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 LINC00597Q9H2U6 94 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 KIAA1549LQ6ZVL6 1849 aa20.3■□□□□ 0.84
KNSTRN-208ENST00000559604 MYH10P35580 1976 aa20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 IKBKBO14920 756 aa20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 OLFM2O95897 454 aa20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 HOXA6P31267 233 aa20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 PPP3CCP48454 512 aa20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 SLC7A9P82251 487 aa20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 SRSF5Q13243 272 aaKnown RBP20.29■□□□□ 0.84
KNSTRN-208ENST00000559604 LPAL2Q16609 132 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms