RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 HVCN1Q96D96 273 aa17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 FUBP3Q96I24 572 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 CNOT6LQ96LI5 555 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 ST6GALNAC4Q9H4F1 302 aa17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 POLR3BQ9NW08 1133 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 EXOC7Q9UPT5 735 aa17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 SCN1AP35498 2009 aa17.14■□□□□ 0.33
CDC42BPB-203ENST00000558867 MYMKA6NI61 221 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 ANKRD63C9JTQ0 380 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 LDHAP00338 332 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 TCF3P15923 654 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 HDCP19113 662 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 CYP2F1P24903 491 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 GRIN1Q05586 938 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 USP4Q13107 963 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 STX1AQ16623 288 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 UAP1L1Q3KQV9 507 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 C2orf27AQ580R0 203 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 SDHAF4Q5VUM1 108 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 ANO7Q6IWH7 933 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 C4orf50Q6ZRC1 276 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 SCN4BQ8IWT1 228 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 EFCAB13Q8IY85 973 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 SH3RF2Q8TEC5 729 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 PIGKQ92643 395 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 CCDC34Q96HJ3 373 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 CYP2S1Q96SQ9 504 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 TPSD1Q9BZJ3 242 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 TMLHEQ9NVH6 421 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 EVLQ9UI08 416 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 RALYQ9UKM9 306 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 INVSQ9Y283 1065 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 BAHCC1Q9P281 2608 aa17.13■□□□□ 0.33
CDC42BPB-203ENST00000558867 POLR2BP30876 1174 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 GPR15P49685 360 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 CFAP221Q4G0U5 840 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 HSF5Q4G112 596 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 RASSF3Q86WH2 238 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 TTC30AQ86WT1 665 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 LRRC52Q8N7C0 313 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 KIAA1958Q8N8K9 716 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 ARL14EPQ8N8R7 260 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 USP33Q8TEY7 942 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 ANP32BQ92688 251 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 RAD54LQ92698 747 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 CEP295NLQ96MC4 621 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 POLMQ9NP87 494 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 ANO10Q9NW15 660 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 GTF3C4Q9UKN8 822 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 MMP17Q9ULZ9 603 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 ARHGAP26Q9UNA1 814 aa17.12■□□□□ 0.33
CDC42BPB-203ENST00000558867 NUP205Q92621 2012 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 ITGB3P05106 788 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 MAGEA11P43364 429 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 ATXN3P54252 364 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 SEC13P55735 322 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 MCM6Q14566 821 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 ZC2HC1CQ53FD0 456 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 LARP4BQ92615 738 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 SCNM1Q9BWG6 230 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 TRPM5Q9NZQ8 1165 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 BCCIPQ9P287 314 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 L1RE1Q9UN81 338 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 THADAQ6YHU6 1953 aa17.11■□□□□ 0.33
CDC42BPB-203ENST00000558867 CDX4O14627 284 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 TNFRSF10BO14763 440 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 ACTN4O43707 911 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 TADA3O75528 432 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 KRT19P08727 400 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 PLCG1P19174 1290 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 ANXA13P27216 316 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 PPP3CCP48454 512 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 IRX4P78413 519 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 RBP5P82980 135 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 CRY1Q16526 586 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 TRIM61Q5EBN2 209 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 ZNF720Q7Z2F6 126 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 CSGALNACT2Q8N6G5 542 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 TOP6BLQ8N6T0 577 aa17.1■□□□□ 0.33
CDC42BPB-203ENST00000558867 STKLD1Q8NE28 680 aa17.1■□□□□ 0.33
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